Protein–RNA interactions for Protein: A0A0A0MS06

TRBV23-1, T-cell receptor beta variable 23-1 (non-functional) (Fragment), humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV23-1A0A0A0MS06 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 ATP13A2-215ENST00000617114 1723 ntTSL 5 BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 AL022069.1-201ENST00000568025 1636 ntBASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC19.1■□□□□ 0.65
TRBV23-1A0A0A0MS06 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 TMEM54-201ENST00000329151 871 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 TK2-202ENST00000417693 1046 ntTSL 2 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC239859.2-201ENST00000444165 318 ntBASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 AC141586.4-201ENST00000624558 1573 ntBASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
TRBV23-1A0A0A0MS06 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV23-1A0A0A0MS06 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV23-1A0A0A0MS06 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV23-1A0A0A0MS06 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC19.08■□□□□ 0.65
TRBV23-1A0A0A0MS06 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
TRBV23-1A0A0A0MS06 HES6-204ENST00000409182 863 ntTSL 2 BASIC19.08■□□□□ 0.64
TRBV23-1A0A0A0MS06 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC19.08■□□□□ 0.64
TRBV23-1A0A0A0MS06 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
TRBV23-1A0A0A0MS06 FAM124A-204ENST00000615498 2383 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 MIR4787-201ENST00000607364 84 ntBASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 AGBL5-201ENST00000323064 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC19.07■□□□□ 0.64
TRBV23-1A0A0A0MS06 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 CD37-213ENST00000598095 1598 ntTSL 2 BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
TRBV23-1A0A0A0MS06 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 SLC25A24-204ENST00000569674 2357 ntBASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 OR2A1-AS1-204ENST00000470435 602 ntBASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
TRBV23-1A0A0A0MS06 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 IGFBP3-202ENST00000381083 1050 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC004448.1-201ENST00000458332 883 ntBASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC092028.1-203ENST00000608262 953 ntBASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC19.04■□□□□ 0.64
TRBV23-1A0A0A0MS06 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 TMC7-205ENST00000569532 2738 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 AL139125.2-201ENST00000623134 1869 ntBASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 SENP5-202ENST00000419026 973 ntTSL 3 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC005551.1-201ENST00000641816 493 ntAPPRIS P1 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC068473.5-201ENST00000616428 2072 ntBASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC131274.2-201ENST00000580697 1507 ntBASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC19.03■□□□□ 0.64
TRBV23-1A0A0A0MS06 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 ECEL1-202ENST00000409941 2322 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 SNX5-217ENST00000606557 1087 ntBASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
TRBV23-1A0A0A0MS06 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
TRBV23-1A0A0A0MS06 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC19.01■□□□□ 0.63
TRBV23-1A0A0A0MS06 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 22.4 ms