Protein–RNA interactions for Protein: Q9UN70

PCDHGC3, Protocadherin gamma-C3, humanhuman

Predictions only

Length 934 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3Q9UN70 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 AC009299.2-201ENST00000482477 511 ntBASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC24.26■■□□□ 1.47
PCDHGC3Q9UN70 DCAF4-206ENST00000509153 1521 ntAPPRIS ALT2 TSL 2 BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 AC119427.1-201ENST00000633182 556 ntTSL 4 BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 ZFYVE19-201ENST00000299173 1555 ntAPPRIS ALT2 TSL 1 (best) BASIC24.25■■□□□ 1.47
PCDHGC3Q9UN70 PLEKHB1-201ENST00000227214 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC3Q9UN70 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC3Q9UN70 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC3Q9UN70 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC24.24■■□□□ 1.47
PCDHGC3Q9UN70 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC24.23■■□□□ 1.47
PCDHGC3Q9UN70 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC24.22■■□□□ 1.47
PCDHGC3Q9UN70 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 STARD3NL-201ENST00000009041 1728 ntAPPRIS P1 TSL 1 (best) BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC24.21■■□□□ 1.47
PCDHGC3Q9UN70 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC24.2■■□□□ 1.47
PCDHGC3Q9UN70 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGC3Q9UN70 LHPP-201ENST00000368839 1522 ntTSL 1 (best) BASIC24.2■■□□□ 1.47
PCDHGC3Q9UN70 OSCAR-211ENST00000617140 1547 ntAPPRIS ALT2 TSL 5 BASIC24.2■■□□□ 1.47
PCDHGC3Q9UN70 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
PCDHGC3Q9UN70 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 SPANXA2-OT1-201ENST00000622372 1686 ntTSL 2 BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 KRT125P-201ENST00000546827 989 ntBASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC24.19■■□□□ 1.46
PCDHGC3Q9UN70 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 ADORA2B-201ENST00000304222 1735 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 PKIG-206ENST00000372892 1338 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 HSPE1-201ENST00000233893 950 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 CLTA-210ENST00000540080 989 ntTSL 2 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 AC092028.1-203ENST00000608262 953 ntBASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC24.18■■□□□ 1.46
PCDHGC3Q9UN70 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 AC239859.2-201ENST00000444165 318 ntBASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 MIR4787-201ENST00000607364 84 ntBASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 MIR6722-201ENST00000617286 78 ntBASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 GRK4-202ENST00000398051 2068 ntTSL 1 (best) BASIC24.17■■□□□ 1.46
PCDHGC3Q9UN70 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC24.16■■□□□ 1.46
PCDHGC3Q9UN70 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC24.15■■□□□ 1.46
PCDHGC3Q9UN70 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC24.15■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 125.5 ms