Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 AC068473.5-201ENST00000616428 2072 ntBASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC27.27■■□□□ 1.96
UPF3BQ9BZI7 AC131274.2-201ENST00000580697 1507 ntBASIC27.26■■□□□ 1.96
UPF3BQ9BZI7 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC27.26■■□□□ 1.96
UPF3BQ9BZI7 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 NFE2L3P1-201ENST00000588207 1959 ntBASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 H2AFY-204ENST00000423969 924 ntTSL 2 BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 AC022616.5-201ENST00000518796 181 ntBASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 AC120024.1-201ENST00000562672 995 ntBASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC27.26■■□□□ 1.95
UPF3BQ9BZI7 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
UPF3BQ9BZI7 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC27.24■■□□□ 1.95
UPF3BQ9BZI7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 AL022069.1-201ENST00000568025 1636 ntBASIC27.23■■□□□ 1.95
UPF3BQ9BZI7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
UPF3BQ9BZI7 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 AC012123.1-201ENST00000426194 1661 ntTSL 5 BASIC27.21■■□□□ 1.95
UPF3BQ9BZI7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
UPF3BQ9BZI7 POU2F3-206ENST00000543440 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.95
UPF3BQ9BZI7 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC27.2■■□□□ 1.95
UPF3BQ9BZI7 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 AL161729.1-201ENST00000604104 1402 ntBASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 PCK2-201ENST00000216780 2357 ntAPPRIS P1 TSL 1 (best) BASIC27.2■■□□□ 1.94
UPF3BQ9BZI7 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 AC074183.2-201ENST00000623112 922 ntBASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 HOMER3-205ENST00000542541 1607 ntAPPRIS P3 TSL 1 (best) BASIC27.19■■□□□ 1.94
UPF3BQ9BZI7 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC27.18■■□□□ 1.94
UPF3BQ9BZI7 SSX2IP-209ENST00000603677 1149 ntTSL 1 (best) BASIC27.17■■□□□ 1.94
UPF3BQ9BZI7 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC27.17■■□□□ 1.94
UPF3BQ9BZI7 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
UPF3BQ9BZI7 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC27.17■■□□□ 1.94
UPF3BQ9BZI7 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 AF131216.4-201ENST00000638924 1588 ntBASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC27.16■■□□□ 1.94
UPF3BQ9BZI7 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC27.16■■□□□ 1.94
Retrieved 100 of 98,524 protein–RNA pairs in 13.2 ms