Protein–RNA interactions for Protein: Q9BZA7

PCDH11X, Protocadherin-11 X-linked, humanhuman

Predictions only

Length 1,347 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11XQ9BZA7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 AC241377.3-202ENST00000626088 1088 ntBASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 AC241585.3-202ENST00000628937 1088 ntBASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 AC245100.8-202ENST00000629247 1058 ntBASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
PCDH11XQ9BZA7 CTAG2-202ENST00000369585 748 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDH11XQ9BZA7 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC30.1■■■□□ 2.41
PCDH11XQ9BZA7 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDH11XQ9BZA7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
PCDH11XQ9BZA7 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC30.09■■■□□ 2.41
PCDH11XQ9BZA7 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PCDH11XQ9BZA7 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
PCDH11XQ9BZA7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
PCDH11XQ9BZA7 HES6-206ENST00000409574 738 ntTSL 2 BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 AL162430.1-201ENST00000480705 870 ntBASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC30.08■■■□□ 2.41
PCDH11XQ9BZA7 IRS3P-201ENST00000223076 1006 ntBASIC30.07■■■□□ 2.4
PCDH11XQ9BZA7 AL121749.1-202ENST00000609313 2153 ntBASIC30.07■■■□□ 2.4
PCDH11XQ9BZA7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 AC006455.2-201ENST00000429931 906 ntBASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC30.06■■■□□ 2.4
PCDH11XQ9BZA7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC30.05■■■□□ 2.4
PCDH11XQ9BZA7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDH11XQ9BZA7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC30.05■■■□□ 2.4
PCDH11XQ9BZA7 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 RHOF-204ENST00000537265 699 ntTSL 2 BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC30.04■■■□□ 2.4
PCDH11XQ9BZA7 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC30.03■■■□□ 2.4
PCDH11XQ9BZA7 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC30.03■■■□□ 2.4
PCDH11XQ9BZA7 LYPLA1-215ENST00000618914 2482 ntTSL 5 BASIC30.03■■■□□ 2.4
PCDH11XQ9BZA7 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
PCDH11XQ9BZA7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC30.03■■■□□ 2.4
PCDH11XQ9BZA7 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 DNAJC25-GNG10-201ENST00000374294 1448 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC30.02■■■□□ 2.4
PCDH11XQ9BZA7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC30.01■■■□□ 2.4
PCDH11XQ9BZA7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.4
PCDH11XQ9BZA7 AC009086.3-201ENST00000623486 1008 ntBASIC30.01■■■□□ 2.4
PCDH11XQ9BZA7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
PCDH11XQ9BZA7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC30.01■■■□□ 2.39
PCDH11XQ9BZA7 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.01■■■□□ 2.39
PCDH11XQ9BZA7 LSR-205ENST00000427250 1606 ntTSL 2 BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 DUSP8P4-201ENST00000399538 1761 ntBASIC30■■■□□ 2.39
PCDH11XQ9BZA7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC30■■■□□ 2.39
PCDH11XQ9BZA7 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 JTB-203ENST00000368589 1216 ntTSL 2 BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 AC233992.3-201ENST00000607491 485 ntBASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 MPST-208ENST00000628507 698 ntTSL 5 BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 LINC00092-201ENST00000412122 1726 ntTSL 1 (best) BASIC29.99■■■□□ 2.39
PCDH11XQ9BZA7 BX842568.3-201ENST00000418104 571 ntBASIC29.98■■■□□ 2.39
PCDH11XQ9BZA7 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC29.98■■■□□ 2.39
PCDH11XQ9BZA7 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC29.98■■■□□ 2.39
PCDH11XQ9BZA7 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC29.98■■■□□ 2.39
PCDH11XQ9BZA7 CD37-213ENST00000598095 1598 ntTSL 2 BASIC29.98■■■□□ 2.39
PCDH11XQ9BZA7 GLI3-203ENST00000437480 451 ntTSL 2 BASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 MIR3181-201ENST00000578512 73 ntBASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 CCDC106-205ENST00000588740 1404 ntAPPRIS P1 TSL 1 (best) BASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC29.97■■■□□ 2.39
PCDH11XQ9BZA7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC29.96■■■□□ 2.39
PCDH11XQ9BZA7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC29.96■■■□□ 2.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms