Protein–RNA interactions for Protein: Q9BYQ7

KRTAP4-1, Keratin-associated protein 4-1, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-1Q9BYQ7 ZDHHC16-206ENST00000370854 1798 ntAPPRIS P4 TSL 1 (best) BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
KRTAP4-1Q9BYQ7 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 HES6-206ENST00000409574 738 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 MYDGF-203ENST00000599630 713 ntTSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 C17orf82-201ENST00000623772 1530 ntBASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
KRTAP4-1Q9BYQ7 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 LY6E-201ENST00000292494 1181 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 PYCARD-AS1-201ENST00000561916 1095 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 AC092803.2-201ENST00000564287 1899 ntBASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 ACP4-201ENST00000270593 1347 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 OAS3-205ENST00000548514 1392 ntTSL 2 BASIC12.03□□□□□ -0.48
KRTAP4-1Q9BYQ7 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP4-1Q9BYQ7 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP4-1Q9BYQ7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
KRTAP4-1Q9BYQ7 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC090192.1-201ENST00000517740 490 ntBASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 AL138724.1-201ENST00000606771 1088 ntBASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC092171.4-201ENST00000609130 632 ntBASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC136469.2-201ENST00000623944 1028 ntBASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC092437.1-201ENST00000624794 1048 ntBASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
KRTAP4-1Q9BYQ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 MIR3181-201ENST00000578512 73 ntBASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 RARRES2P11-201ENST00000635158 484 ntBASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 SAMD13-205ENST00000370673 1567 ntTSL 2 BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
KRTAP4-1Q9BYQ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 BAMBI-201ENST00000375533 1877 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 TSNARE1-208ENST00000524325 1963 ntAPPRIS P3 TSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 NEBL-AS1-202ENST00000439097 661 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC022517.1-201ENST00000592429 346 ntBASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 NKILA-201ENST00000613231 537 ntTSL 4 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 HNRNPAB-201ENST00000355836 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
KRTAP4-1Q9BYQ7 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 NME4-201ENST00000219479 995 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 KRT18P5-201ENST00000436075 1291 ntBASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 AC233992.3-201ENST00000607491 485 ntBASIC11.99□□□□□ -0.49
KRTAP4-1Q9BYQ7 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC11.99□□□□□ -0.49
Retrieved 100 of 98,524 protein–RNA pairs in 86.5 ms