Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 PROC-203ENST00000409048 1586 ntTSL 5 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
CSMD1Q96PZ7 AC006015.1-201ENST00000429970 570 ntBASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 CBWD3-212ENST00000616550 721 ntTSL 2 BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 CBWD6-216ENST00000617933 721 ntTSL 3 BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 CROCCP5-201ENST00000436658 830 ntBASIC19.7■□□□□ 0.74
CSMD1Q96PZ7 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 TSPY20P-201ENST00000450910 630 ntBASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 MAP2K4P1-201ENST00000438453 1195 ntBASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 MIR6722-201ENST00000617286 78 ntBASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 TMEM191A-211ENST00000637163 1067 ntBASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
CSMD1Q96PZ7 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 C17orf82-201ENST00000623772 1530 ntBASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC19.68■□□□□ 0.74
CSMD1Q96PZ7 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 NOX4-204ENST00000393282 560 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC19.67■□□□□ 0.74
CSMD1Q96PZ7 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 NME4-202ENST00000382940 766 ntTSL 3 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 KRT18P61-201ENST00000585825 1298 ntBASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 NME4-211ENST00000620944 1193 ntTSL 2 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 TMEM121-201ENST00000392519 1532 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
CSMD1Q96PZ7 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 GXYLT1P2-201ENST00000433312 1230 ntBASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 AL499627.2-201ENST00000606283 725 ntBASIC19.65■□□□□ 0.74
CSMD1Q96PZ7 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSMD1Q96PZ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
CSMD1Q96PZ7 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
CSMD1Q96PZ7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD1Q96PZ7 AC099791.2-201ENST00000605725 427 ntBASIC19.64■□□□□ 0.73
CSMD1Q96PZ7 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.64■□□□□ 0.73
CSMD1Q96PZ7 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD1Q96PZ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
CSMD1Q96PZ7 CCDC92B-201ENST00000575506 885 ntBASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 MPST-208ENST00000628507 698 ntTSL 5 BASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 AC093827.2-201ENST00000512654 315 ntBASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 AL358852.1-201ENST00000623174 1268 ntBASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.63■□□□□ 0.73
CSMD1Q96PZ7 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
CSMD1Q96PZ7 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 AL355802.2-201ENST00000402069 882 ntBASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 AC080038.1-201ENST00000611274 1154 ntBASIC19.61■□□□□ 0.73
CSMD1Q96PZ7 AC009102.2-201ENST00000606772 1639 ntBASIC19.61■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms