Protein–RNA interactions for Protein: Q08285

RRP40, Exosome complex component RRP40, yeastyeast

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP40Q08285 ASA1YPR085C 1332 nt4.58□□□□□ -1.68
RRP40Q08285 NOP16YER002W 696 nt4.58□□□□□ -1.68
RRP40Q08285 RPL28YGL103W 450 nt4.58□□□□□ -1.68
RRP40Q08285 TRX2YGR209C 315 nt4.58□□□□□ -1.68
RRP40Q08285 YHR212W-AYHR212W-A 204 nt4.58□□□□□ -1.68
RRP40Q08285 YAR061WYAR061W 204 nt4.58□□□□□ -1.68
RRP40Q08285 YNL296WYNL296W 315 nt4.58□□□□□ -1.68
RRP40Q08285 YNR042WYNR042W 429 nt4.58□□□□□ -1.68
RRP40Q08285 YMR102CYMR102C 2505 nt4.57□□□□□ -1.68
RRP40Q08285 RAD16YBR114W 2373 nt4.57□□□□□ -1.68
RRP40Q08285 APM4YOL062C 1476 nt4.57□□□□□ -1.68
RRP40Q08285 HRR25YPL204W 1485 nt4.57□□□□□ -1.68
RRP40Q08285 DOA1YKL213C 2148 nt4.57□□□□□ -1.68
RRP40Q08285 YJR124CYJR124C 1347 nt4.57□□□□□ -1.68
RRP40Q08285 MHF2YDL160C-A 243 nt4.57□□□□□ -1.68
RRP40Q08285 YDR417CYDR417C 372 nt4.57□□□□□ -1.68
RRP40Q08285 tX(XXX)DtX(XXX)D 100 nt4.57□□□□□ -1.68
RRP40Q08285 TLG2YOL018C 1194 nt4.57□□□□□ -1.68
RRP40Q08285 YPL199CYPL199C 723 nt4.57□□□□□ -1.68
RRP40Q08285 HPC2YBR215W 1878 nt4.56□□□□□ -1.68
RRP40Q08285 YLH47YPR125W 1365 nt4.56□□□□□ -1.68
RRP40Q08285 ECM15YBL001C 315 nt4.56□□□□□ -1.68
RRP40Q08285 YBR016WYBR016W 387 nt4.56□□□□□ -1.68
RRP40Q08285 QCR2YPR191W 1107 nt4.56□□□□□ -1.68
RRP40Q08285 DPB2YPR175W 2070 nt4.56□□□□□ -1.68
RRP40Q08285 IPK1YDR315C 846 nt4.55□□□□□ -1.68
RRP40Q08285 NPT1YOR209C 1290 nt4.55□□□□□ -1.68
RRP40Q08285 NHP6AYPR052C 282 nt4.55□□□□□ -1.68
RRP40Q08285 DBF2YGR092W 1719 nt4.55□□□□□ -1.68
RRP40Q08285 YMD8YML038C 1329 nt4.54□□□□□ -1.68
RRP40Q08285 UBX7YBR273C 1311 nt4.54□□□□□ -1.68
RRP40Q08285 BUD22YMR014W 1560 nt4.54□□□□□ -1.68
RRP40Q08285 AUA1YFL010W-A 285 nt4.54□□□□□ -1.68
RRP40Q08285 YGR016WYGR016W 573 nt4.54□□□□□ -1.68
RRP40Q08285 ATG33YLR356W 594 nt4.54□□□□□ -1.68
RRP40Q08285 YMR010WYMR010W 1218 nt4.54□□□□□ -1.68
RRP40Q08285 URA7YBL039C 1740 nt4.54□□□□□ -1.68
RRP40Q08285 NUP1YOR098C 3231 nt4.53□□□□□ -1.68
RRP40Q08285 YJL206CYJL206C 2277 nt4.53□□□□□ -1.68
RRP40Q08285 AIR2YDL175C 1035 nt4.53□□□□□ -1.68
RRP40Q08285 MRP21YBL090W 534 nt4.53□□□□□ -1.68
RRP40Q08285 TRS33YOR115C 807 nt4.53□□□□□ -1.68
RRP40Q08285 ECM2YBR065C 1095 nt4.53□□□□□ -1.68
RRP40Q08285 GCN20YFR009W 2259 nt4.53□□□□□ -1.68
RRP40Q08285 RCK1YGL158W 1539 nt4.52□□□□□ -1.69
RRP40Q08285 RPL12AYEL054C 498 nt4.52□□□□□ -1.69
RRP40Q08285 NPY1YGL067W 1155 nt4.52□□□□□ -1.69
RRP40Q08285 snR17bsnR17b 332 nt4.52□□□□□ -1.69
RRP40Q08285 HAL1YPR005C 885 nt4.52□□□□□ -1.69
RRP40Q08285 MSE1YOL033W 1611 nt4.52□□□□□ -1.69
RRP40Q08285 FAP1YNL023C 2898 nt4.52□□□□□ -1.69
RRP40Q08285 PUT1YLR142W 1431 nt4.52□□□□□ -1.69
RRP40Q08285 MLF3YNL074C 1359 nt4.52□□□□□ -1.69
RRP40Q08285 TFC7YOR110W 1308 nt4.51□□□□□ -1.69
RRP40Q08285 AXL2YIL140W 2472 nt4.51□□□□□ -1.69
RRP40Q08285 YCR075W-AYCR075W-A 228 nt4.51□□□□□ -1.69
RRP40Q08285 YGR153WYGR153W 654 nt4.51□□□□□ -1.69
RRP40Q08285 BNS1YGR230W 414 nt4.51□□□□□ -1.69
RRP40Q08285 MRPL39YML009C 213 nt4.51□□□□□ -1.69
RRP40Q08285 MBP1YDL056W 2502 nt4.5□□□□□ -1.69
RRP40Q08285 MOT2YER068W 1764 nt4.5□□□□□ -1.69
RRP40Q08285 RPS16BYDL083C 432 nt4.5□□□□□ -1.69
RRP40Q08285 PEX7YDR142C 1128 nt4.5□□□□□ -1.69
RRP40Q08285 SWP1YMR149W 861 nt4.5□□□□□ -1.69
RRP40Q08285 ARG8YOL140W 1272 nt4.5□□□□□ -1.69
RRP40Q08285 CDC21YOR074C 915 nt4.5□□□□□ -1.69
RRP40Q08285 TGS1YPL157W 948 nt4.5□□□□□ -1.69
RRP40Q08285 PRO2YOR323C 1371 nt4.5□□□□□ -1.69
RRP40Q08285 PCA1YBR295W 3651 nt4.5□□□□□ -1.69
RRP40Q08285 GUS1YGL245W 2127 nt4.49□□□□□ -1.69
RRP40Q08285 CAB1YDR531W 1104 nt4.49□□□□□ -1.69
RRP40Q08285 YEL053W-AYEL053W-A 348 nt4.49□□□□□ -1.69
RRP40Q08285 FMP33YJL161W 543 nt4.49□□□□□ -1.69
RRP40Q08285 MGR2YPL098C 342 nt4.49□□□□□ -1.69
RRP40Q08285 BUD7YOR299W 2241 nt4.49□□□□□ -1.69
RRP40Q08285 AIM10YER087W 1731 nt4.49□□□□□ -1.69
RRP40Q08285 GMC1YDR506C 1827 nt4.49□□□□□ -1.69
RRP40Q08285 PEX29YDR479C 1665 nt4.48□□□□□ -1.69
RRP40Q08285 HOF1YMR032W 2010 nt4.48□□□□□ -1.69
RRP40Q08285 YDL027CYDL027C 1263 nt4.48□□□□□ -1.69
RRP40Q08285 YHR095WYHR095W 495 nt4.48□□□□□ -1.69
RRP40Q08285 APS1YLR170C 471 nt4.48□□□□□ -1.69
RRP40Q08285 YMR105W-AYMR105W-A 195 nt4.48□□□□□ -1.69
RRP40Q08285 YPL191CYPL191C 1083 nt4.48□□□□□ -1.69
RRP40Q08285 IMD3YLR432W 1572 nt4.48□□□□□ -1.69
RRP40Q08285 RRP3YHR065C 1506 nt4.47□□□□□ -1.69
RRP40Q08285 TEF4YKL081W 1239 nt4.47□□□□□ -1.69
RRP40Q08285 MIM2YLR099W-A 264 nt4.47□□□□□ -1.69
RRP40Q08285 YAR019W-AYAR019W-A 333 nt4.47□□□□□ -1.69
RRP40Q08285 YIF1YNL263C 945 nt4.47□□□□□ -1.69
RRP40Q08285 PZF1YPR186C 1290 nt4.47□□□□□ -1.69
RRP40Q08285 PRM1YNL279W 1986 nt4.47□□□□□ -1.69
RRP40Q08285 NUP116YMR047C 3342 nt4.47□□□□□ -1.69
RRP40Q08285 FRE1YLR214W 2061 nt4.47□□□□□ -1.69
RRP40Q08285 FZO1YBR179C 2568 nt4.47□□□□□ -1.69
RRP40Q08285 PGM2YMR105C 1710 nt4.46□□□□□ -1.69
RRP40Q08285 GAL4YPL248C 2646 nt4.46□□□□□ -1.69
RRP40Q08285 ABF1YKL112W 2196 nt4.46□□□□□ -1.7
RRP40Q08285 SUR2YDR297W 1050 nt4.46□□□□□ -1.7
RRP40Q08285 RPL34AYER056C-A 366 nt4.46□□□□□ -1.7
Retrieved 100 of 7,029 protein–RNA pairs in 50.5 ms