Protein–RNA interactions for Protein: P67809

YBX1, Nuclease-sensitive element-binding protein 1, humanhuman

Known RBP Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1P67809 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC22.36■■□□□ 1.17
YBX1P67809 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
YBX1P67809 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
YBX1P67809 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC22.35■■□□□ 1.17
YBX1P67809 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC22.35■■□□□ 1.17
YBX1P67809 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
YBX1P67809 NEUROG3-201ENST00000242462 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
YBX1P67809 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC22.34■■□□□ 1.17
YBX1P67809 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC22.34■■□□□ 1.17
YBX1P67809 AC239859.2-201ENST00000444165 318 ntBASIC22.34■■□□□ 1.17
YBX1P67809 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC22.34■■□□□ 1.17
YBX1P67809 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC22.34■■□□□ 1.17
YBX1P67809 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.34■■□□□ 1.17
YBX1P67809 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
YBX1P67809 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC22.34■■□□□ 1.17
YBX1P67809 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
YBX1P67809 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC22.33■■□□□ 1.17
YBX1P67809 C9orf163-202ENST00000624034 2573 ntBASIC22.33■■□□□ 1.17
YBX1P67809 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC22.33■■□□□ 1.17
YBX1P67809 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC22.33■■□□□ 1.17
YBX1P67809 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC22.33■■□□□ 1.17
YBX1P67809 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC22.33■■□□□ 1.16
YBX1P67809 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
YBX1P67809 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC22.33■■□□□ 1.16
YBX1P67809 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.33■■□□□ 1.16
YBX1P67809 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC22.33■■□□□ 1.16
YBX1P67809 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
YBX1P67809 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC22.32■■□□□ 1.16
YBX1P67809 SENP5-202ENST00000419026 973 ntTSL 3 BASIC22.32■■□□□ 1.16
YBX1P67809 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC22.32■■□□□ 1.16
YBX1P67809 MIR663AHG-227ENST00000608084 765 ntTSL 5 BASIC22.32■■□□□ 1.16
YBX1P67809 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC22.32■■□□□ 1.16
YBX1P67809 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC22.31■■□□□ 1.16
YBX1P67809 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 CENPX-202ENST00000392359 805 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
YBX1P67809 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 AC138207.2-201ENST00000583377 492 ntTSL 2 BASIC22.31■■□□□ 1.16
YBX1P67809 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
YBX1P67809 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.31■■□□□ 1.16
YBX1P67809 PNCK-215ENST00000447676 1585 ntTSL 2 BASIC22.3■■□□□ 1.16
YBX1P67809 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
YBX1P67809 PNMT-201ENST00000269582 1253 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
YBX1P67809 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC22.3■■□□□ 1.16
YBX1P67809 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
YBX1P67809 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
YBX1P67809 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
YBX1P67809 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC22.29■■□□□ 1.16
YBX1P67809 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC22.29■■□□□ 1.16
YBX1P67809 AC021242.3-201ENST00000607598 1377 ntBASIC22.29■■□□□ 1.16
YBX1P67809 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
YBX1P67809 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC22.29■■□□□ 1.16
YBX1P67809 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.29■■□□□ 1.16
YBX1P67809 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.28■■□□□ 1.16
YBX1P67809 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
YBX1P67809 AC131274.2-201ENST00000580697 1507 ntBASIC22.28■■□□□ 1.16
YBX1P67809 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC22.28■■□□□ 1.16
YBX1P67809 BX664725.1-201ENST00000438252 379 ntBASIC22.28■■□□□ 1.16
YBX1P67809 OR2A1-AS1-204ENST00000470435 602 ntBASIC22.28■■□□□ 1.16
YBX1P67809 AC092849.1-201ENST00000475250 303 ntTSL 4 BASIC22.28■■□□□ 1.16
YBX1P67809 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
YBX1P67809 AC141586.4-201ENST00000624558 1573 ntBASIC22.28■■□□□ 1.16
YBX1P67809 AC012676.1-201ENST00000574705 1949 ntBASIC22.27■■□□□ 1.16
YBX1P67809 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
YBX1P67809 LSM7-204ENST00000587502 575 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC22.27■■□□□ 1.16
YBX1P67809 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
YBX1P67809 STEAP2-207ENST00000402625 1372 ntTSL 5 BASIC22.26■■□□□ 1.15
YBX1P67809 PFKFB4-204ENST00000416568 1575 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YBX1P67809 MT1E-201ENST00000306061 704 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
YBX1P67809 LBH-205ENST00000407930 756 ntTSL 2 BASIC22.26■■□□□ 1.15
YBX1P67809 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
YBX1P67809 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC22.26■■□□□ 1.15
YBX1P67809 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC22.26■■□□□ 1.15
YBX1P67809 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
YBX1P67809 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
YBX1P67809 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.25■■□□□ 1.15
YBX1P67809 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.25■■□□□ 1.15
YBX1P67809 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
YBX1P67809 Z92544.1-202ENST00000571933 1220 ntBASIC22.25■■□□□ 1.15
YBX1P67809 MIR4787-201ENST00000607364 84 ntBASIC22.25■■□□□ 1.15
YBX1P67809 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC22.25■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 269.3 ms