Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 AL022341.2-201ENST00000573609 1417 ntTSL 3 BASIC18.99■□□□□ 0.63
CTSDP07339 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC18.99■□□□□ 0.63
CTSDP07339 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC18.99■□□□□ 0.63
CTSDP07339 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
CTSDP07339 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC18.98■□□□□ 0.63
CTSDP07339 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CTSDP07339 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC18.98■□□□□ 0.63
CTSDP07339 AC127496.7-201ENST00000625110 1798 ntBASIC18.98■□□□□ 0.63
CTSDP07339 AL161729.1-201ENST00000604104 1402 ntBASIC18.98■□□□□ 0.63
CTSDP07339 GRM6-202ENST00000517717 2673 ntAPPRIS P1 TSL 5 BASIC18.97■□□□□ 0.63
CTSDP07339 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.97■□□□□ 0.63
CTSDP07339 ECEL1P2-201ENST00000461596 1295 ntBASIC18.97■□□□□ 0.63
CTSDP07339 ZGPAT-201ENST00000328969 1945 ntTSL 2 BASIC18.97■□□□□ 0.63
CTSDP07339 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 GUSBP5-202ENST00000510805 1989 ntBASIC18.97■□□□□ 0.63
CTSDP07339 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.97■□□□□ 0.63
CTSDP07339 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
CTSDP07339 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 RNF4-207ENST00000506706 2098 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC18.96■□□□□ 0.63
CTSDP07339 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CTSDP07339 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 RNF39-201ENST00000244360 2206 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CTSDP07339 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 ECEL1P1-201ENST00000373592 1742 ntBASIC18.95■□□□□ 0.62
CTSDP07339 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC18.95■□□□□ 0.62
CTSDP07339 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CTSDP07339 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC18.95■□□□□ 0.62
CTSDP07339 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CTSDP07339 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CTSDP07339 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 NRSN1-204ENST00000378491 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC18.93■□□□□ 0.62
CTSDP07339 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CTSDP07339 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC18.93■□□□□ 0.62
CTSDP07339 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC18.93■□□□□ 0.62
CTSDP07339 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSDP07339 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 CD37-213ENST00000598095 1598 ntTSL 2 BASIC18.93■□□□□ 0.62
CTSDP07339 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CTSDP07339 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 IQCJ-SCHIP1-202ENST00000460298 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CTSDP07339 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 RPS2-202ENST00000526522 924 ntTSL 2 BASIC18.92■□□□□ 0.62
CTSDP07339 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 RBFOX1-206ENST00000535565 1599 ntTSL 2 BASIC18.92■□□□□ 0.62
CTSDP07339 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.92■□□□□ 0.62
CTSDP07339 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CTSDP07339 MSRB1-206ENST00000622125 1363 ntAPPRIS ALT1 TSL 5 BASIC18.92■□□□□ 0.62
CTSDP07339 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CTSDP07339 RASL10A-201ENST00000216101 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.91■□□□□ 0.62
CTSDP07339 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.91■□□□□ 0.62
CTSDP07339 MIR639-201ENST00000384974 98 ntBASIC18.91■□□□□ 0.62
CTSDP07339 AC137767.1-201ENST00000602918 1920 ntBASIC18.91■□□□□ 0.62
CTSDP07339 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC18.91■□□□□ 0.62
CTSDP07339 PARL-202ENST00000317096 1414 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CTSDP07339 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 PRPSAP2-201ENST00000268835 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC18.9■□□□□ 0.62
CTSDP07339 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
CTSDP07339 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 68.9 ms