Protein–RNA interactions for Protein: O75940

SMNDC1, Survival of motor neuron-related-splicing factor 30, humanhuman

Known RBP eCLIP

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1O75940 ZWINT-209ENST00000494312 1961 ntTSL 212.63□□□□□ -0.394e-10■■■■□ 23.8
SMNDC1O75940 AP1G2-205ENST00000535852 2471 ntTSL 1 (best)12.49□□□□□ -0.411e-8■■■■□ 23.8
SMNDC1O75940 UNKL-210ENST00000508903 3430 ntAPPRIS P5 TSL 5 BASIC12.38□□□□□ -0.431e-6■■■■□ 23.8
SMNDC1O75940 ZWINT-204ENST00000395405 1851 ntAPPRIS P3 TSL 2 BASIC12.2□□□□□ -0.464e-10■■■■□ 23.8
SMNDC1O75940 ZWINT-208ENST00000489649 1621 ntTSL 512.08□□□□□ -0.484e-10■■■■□ 23.8
SMNDC1O75940 ZWINT-202ENST00000361148 807 ntAPPRIS ALT2 TSL 2 BASIC11.6□□□□□ -0.554e-10■■■■□ 23.8
SMNDC1O75940 ZWINT-206ENST00000467523 663 ntTSL 511.23□□□□□ -0.614e-10■■■■□ 23.8
SMNDC1O75940 ZWINT-207ENST00000478181 793 ntTSL 37.28□□□□□ -1.244e-10■■■■□ 23.8
SMNDC1O75940 SNORD98-201ENST00000636377 67 ntBASIC4.07□□□□□ -1.761e-323■■■■□ 23.8
SMNDC1O75940 KLF16-203ENST00000592313 508 ntTSL 3 BASIC25.01■■□□□ 1.592e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.215e-6■■■■□ 23.8
SMNDC1O75940 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.082e-6■■■■□ 23.8
SMNDC1O75940 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.032e-6■■■■□ 23.8
SMNDC1O75940 DDX51-201ENST00000329073 2341 ntTSL 521.44■■□□□ 1.022e-6■■■■□ 23.8
SMNDC1O75940 MOK-219ENST00000521766 2736 ntTSL 220.43■□□□□ 0.862e-6■■■■□ 23.8
SMNDC1O75940 KLF16-202ENST00000541015 1134 ntTSL 1 (best)19.92■□□□□ 0.782e-6■■■■□ 23.8
SMNDC1O75940 DDX51-205ENST00000545991 1734 ntTSL 519.69■□□□□ 0.742e-6■■■■□ 23.8
SMNDC1O75940 MOK-210ENST00000519569 2355 ntTSL 219.32■□□□□ 0.682e-6■■■■□ 23.8
SMNDC1O75940 MOK-226ENST00000522874 1890 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.62e-6■■■■□ 23.8
SMNDC1O75940 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.582e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-221ENST00000523131 567 ntTSL 518.6■□□□□ 0.575e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-208ENST00000418997 996 ntTSL 218.19■□□□□ 0.55e-6■■■■□ 23.8
SMNDC1O75940 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.52e-6■■■■□ 23.8
SMNDC1O75940 MOK-229ENST00000523485 2705 ntTSL 218.03■□□□□ 0.482e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.455e-6■■■■□ 23.8
SMNDC1O75940 MOK-233ENST00000524214 1539 ntTSL 2 BASIC17.88■□□□□ 0.452e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-223ENST00000523938 626 ntTSL 517.86■□□□□ 0.455e-6■■■■□ 23.8
SMNDC1O75940 CLASRP-215ENST00000592056 582 ntTSL 217.54■□□□□ 0.42e-6■■■■□ 23.8
SMNDC1O75940 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.52■□□□□ 0.42e-6■■■■□ 23.8
SMNDC1O75940 MOK-207ENST00000518686 2897 ntTSL 217.38■□□□□ 0.372e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-210ENST00000437293 701 ntTSL 317.21■□□□□ 0.355e-6■■■■□ 23.8
SMNDC1O75940 CNN2-209ENST00000568865 1332 ntTSL 517.06■□□□□ 0.322e-6■■■■□ 23.8
SMNDC1O75940 MOK-215ENST00000520266 878 ntTSL 316.92■□□□□ 0.32e-6■■■■□ 23.8
SMNDC1O75940 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC16.78■□□□□ 0.282e-6■■■■□ 23.8
SMNDC1O75940 PRSS21-205ENST00000571141 484 ntTSL 216.65■□□□□ 0.262e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-215ENST00000518736 883 ntTSL 316.14■□□□□ 0.175e-6■■■■□ 23.8
SMNDC1O75940 MOK-208ENST00000519058 917 ntTSL 2 BASIC15.81■□□□□ 0.122e-6■■■■□ 23.8
SMNDC1O75940 DDX51-204ENST00000541489 806 ntTSL 1 (best)15.58■□□□□ 0.082e-6■■■■□ 23.8
SMNDC1O75940 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.042e-6■■■■□ 23.8
SMNDC1O75940 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC15.32■□□□□ 0.042e-6■■■■□ 23.8
SMNDC1O75940 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC15.27■□□□□ 0.042e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -05e-6■■■■□ 23.8
SMNDC1O75940 WDR46-239ENST00000489905 1007 ntTSL 514.97□□□□□ -0.012e-6■■■■□ 23.8
SMNDC1O75940 CNN2-212ENST00000607102 307 ntTSL 1 (best)14.33□□□□□ -0.122e-6■■■■□ 23.8
SMNDC1O75940 CNN2-202ENST00000348419 2033 ntTSL 2 BASIC14.05□□□□□ -0.162e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-206ENST00000395957 5248 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.235e-6■■■■□ 23.8
SMNDC1O75940 CNN2-210ENST00000569352 731 ntTSL 513.23□□□□□ -0.292e-6■■■■□ 23.8
SMNDC1O75940 CNN2-204ENST00000562075 623 ntTSL 1 (best)13□□□□□ -0.332e-6■■■■□ 23.8
SMNDC1O75940 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.362e-6■■■■□ 23.8
SMNDC1O75940 CNN2-207ENST00000565096 2109 ntTSL 2 BASIC12.52□□□□□ -0.42e-6■■■■□ 23.8
SMNDC1O75940 MOK-236ENST00000559138 2041 ntTSL 1 (best)12.45□□□□□ -0.422e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-212ENST00000480304 2247 ntTSL 212.29□□□□□ -0.445e-6■■■■□ 23.8
SMNDC1O75940 UBE2I-219ENST00000568989 498 ntTSL 212.21□□□□□ -0.452e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-207ENST00000395958 3066 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.55e-6■■■■□ 23.8
SMNDC1O75940 MOK-238ENST00000559838 643 ntTSL 311.64□□□□□ -0.552e-6■■■■□ 23.8
SMNDC1O75940 CNN2-208ENST00000566695 828 ntTSL 210.97□□□□□ -0.652e-6■■■■□ 23.8
SMNDC1O75940 MRAS-201ENST00000289104 4538 ntAPPRIS P1 TSL 2 BASIC10.68□□□□□ -0.72e-6■■■■□ 23.8
SMNDC1O75940 MOK-240ENST00000562292 735 ntTSL 510.58□□□□□ -0.722e-6■■■■□ 23.8
SMNDC1O75940 CNN2-211ENST00000606983 537 ntTSL 310□□□□□ -0.812e-6■■■■□ 23.8
SMNDC1O75940 CLASRP-212ENST00000588936 590 ntTSL 49.98□□□□□ -0.812e-6■■■■□ 23.8
SMNDC1O75940 MRAS-210ENST00000614350 4377 ntTSL 2 BASIC9.81□□□□□ -0.842e-6■■■■□ 23.8
SMNDC1O75940 MOK-217ENST00000521388 770 ntTSL 59.77□□□□□ -0.852e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-216ENST00000521309 1399 ntTSL 2 BASIC9.67□□□□□ -0.865e-6■■■■□ 23.8
SMNDC1O75940 MOK-235ENST00000557823 635 ntTSL 39.37□□□□□ -0.912e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-217ENST00000521328 511 ntTSL 59.33□□□□□ -0.925e-6■■■■□ 23.8
SMNDC1O75940 WDR46-232ENST00000444176 968 ntTSL 59.14□□□□□ -0.952e-6■■■■□ 23.8
SMNDC1O75940 MOK-231ENST00000524120 546 ntTSL 39.11□□□□□ -0.952e-6■■■■□ 23.8
SMNDC1O75940 U1.30-201ENST00000622285 165 ntBASIC8.93□□□□□ -0.985e-12■■■■□ 23.8
SMNDC1O75940 YWHAZ-202ENST00000395948 812 ntTSL 3 BASIC8.75□□□□□ -1.015e-6■■■■□ 23.8
SMNDC1O75940 CLASRP-209ENST00000588016 967 ntTSL 28.33□□□□□ -1.082e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-211ENST00000457309 3007 ntAPPRIS P1 TSL 2 BASIC4.87□□□□□ -1.635e-6■■■■□ 23.8
SMNDC1O75940 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC4.59□□□□□ -1.685e-6■■■■□ 23.8
SMNDC1O75940 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.761e-7■■■■□ 23.8
SMNDC1O75940 PPTC7-202ENST00000548721 1471 ntTSL 28.19□□□□□ -1.11e-7■■■■□ 23.8
SMNDC1O75940 ARFRP1-203ENST00000609188 225 ntTSL 515.42■□□□□ 0.069e-8■■■■□ 23.8
SMNDC1O75940 SNHG19-201ENST00000563192 342 ntTSL 2 BASIC7.42□□□□□ -1.221e-323■■■■□ 23.8
SMNDC1O75940 snoR1.1-201ENST00000628177 80 ntBASIC0.48□□□□□ -2.331e-323■■■■□ 23.8
SMNDC1O75940 SNORD60-201ENST00000383903 83 ntBASIC-0.5□□□□□ -2.491e-323■■■■□ 23.8
SMNDC1O75940 SNORD83B-201ENST00000386745 93 ntBASIC-1.02□□□□□ -2.574e-48■■■■□ 23.7
SMNDC1O75940 ZNF598-206ENST00000564824 2147 ntTSL 524.55■■□□□ 1.521e-6■■■■□ 23.7
SMNDC1O75940 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.321e-6■■■■□ 23.7
SMNDC1O75940 ZNF598-203ENST00000562988 3382 ntTSL 520.28■□□□□ 0.841e-6■■■■□ 23.7
SMNDC1O75940 ZNF598-207ENST00000565396 4457 ntTSL 220.05■□□□□ 0.81e-6■■■■□ 23.7
SMNDC1O75940 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.781e-6■■■■□ 23.7
SMNDC1O75940 PFKL-205ENST00000466134 5986 ntTSL 220.85■□□□□ 0.934e-7■■■■□ 23.7
SMNDC1O75940 PFKL-210ENST00000496824 1063 ntTSL 517.82■□□□□ 0.444e-7■■■■□ 23.7
SMNDC1O75940 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.44e-7■■■■□ 23.7
SMNDC1O75940 PFKL-202ENST00000397961 3390 ntTSL 1 (best)15.02■□□□□ -04e-7■■■■□ 23.7
SMNDC1O75940 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.685e-12■■■■□ 23.6
SMNDC1O75940 SMARCC1-202ENST00000425518 3827 ntTSL 27.9□□□□□ -1.145e-12■■■■□ 23.6
SMNDC1O75940 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.126e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-209ENST00000573554 606 ntTSL 1 (best)15.06■□□□□ 06e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.556e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-208ENST00000572008 797 ntTSL 59.4□□□□□ -0.96e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-203ENST00000563390 525 ntAPPRIS P1 TSL 1 (best) BASIC9.4□□□□□ -0.96e-8■■■■□ 23.6
SMNDC1O75940 AC138811.2-201ENST00000567078 764 ntAPPRIS P1 TSL 3 BASIC6.13□□□□□ -1.436e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-212ENST00000576008 589 ntTSL 1 (best)5.89□□□□□ -1.476e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-202ENST00000562935 427 ntTSL 25.89□□□□□ -1.476e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-207ENST00000569365 481 ntTSL 35.89□□□□□ -1.476e-8■■■■□ 23.6
SMNDC1O75940 RPS15A-210ENST00000574723 418 ntTSL 35□□□□□ -1.616e-8■■■■□ 23.6
Retrieved 100 of 11,362 protein–RNA pairs in 343.8 ms