RNA–Protein interactions for RNA: ENST00000565096.6

CNN2-207, Transcript of calponin 2, humanhuman

TSL 2 BASIC

Gene CNN2, Length 2,109 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN2-207ENST00000565096 NISCHQ9Y2I1 1504 aa27.76■■■□□ 2.03
CNN2-207ENST00000565096 CCDC180Q9P1Z9 1646 aa24.83■■□□□ 1.57
CNN2-207ENST00000565096 ABCC9O60706 1549 aa24.18■■□□□ 1.46
CNN2-207ENST00000565096 RB1CC1Q8TDY2 1594 aa23.32■■□□□ 1.32
CNN2-207ENST00000565096 NACADO15069 1562 aa23.3■■□□□ 1.32
CNN2-207ENST00000565096 MYO15BQ96JP2 1530 aa23.19■■□□□ 1.3
CNN2-207ENST00000565096 ZCCHC6Q5VYS8 1495 aaKnown RBP23.13■■□□□ 1.29
CNN2-207ENST00000565096 DCAF1Q9Y4B6 1507 aa23.04■■□□□ 1.28
CNN2-207ENST00000565096 UNC13AQ9UPW8 1703 aa22.91■■□□□ 1.26
CNN2-207ENST00000565096 DCAF8L2P0C7V8 631 aa22.9■■□□□ 1.26
CNN2-207ENST00000565096 BICRAQ9NZM4 1560 aa22.68■■□□□ 1.22
CNN2-207ENST00000565096 SCRIBQ14160 1630 aa22.51■■□□□ 1.19
CNN2-207ENST00000565096 PABPN1Q86U42 306 aaKnown RBP eCLIP22.49■■□□□ 1.19
CNN2-207ENST00000565096 SHROOM4Q9ULL8 1493 aa22.47■■□□□ 1.19
CNN2-207ENST00000565096 DNAJC5BQ9UF47 199 aa22.27■■□□□ 1.16
CNN2-207ENST00000565096 EIF4G1Q04637 1599 aaKnown RBP22.03■■□□□ 1.12
CNN2-207ENST00000565096 CC2D2AQ9P2K1 1620 aa21.96■■□□□ 1.11
CNN2-207ENST00000565096 CECR2Q9BXF3 1484 aa21.77■■□□□ 1.08
CNN2-207ENST00000565096 SMARCA4P51532 1647 aa21.59■■□□□ 1.05
CNN2-207ENST00000565096 BAZ1AQ9NRL2 1556 aaPredicted RBP21.52■■□□□ 1.04
CNN2-207ENST00000565096 NCAPD3P42695 1498 aa21.47■■□□□ 1.03
CNN2-207ENST00000565096 ATAD2BQ9ULI0 1458 aa21.45■■□□□ 1.02
CNN2-207ENST00000565096 SMARCA2P51531 1590 aa21.44■■□□□ 1.02
CNN2-207ENST00000565096 PEG3Q9GZU2 1588 aa21.43■■□□□ 1.02
CNN2-207ENST00000565096 SUPT5HO00267 1087 aaKnown RBP21.43■■□□□ 1.02
CNN2-207ENST00000565096 HMGXB3Q12766 1538 aa21.41■■□□□ 1.02
CNN2-207ENST00000565096 MROH2BQ7Z745 1585 aa21.37■■□□□ 1.01
CNN2-207ENST00000565096 BAZ1BQ9UIG0 1483 aaKnown RBP21.23■□□□□ 0.99
CNN2-207ENST00000565096 WIZO95785 1651 aa21.15■□□□□ 0.98
CNN2-207ENST00000565096 RSF1Q96T23 1441 aaPredicted RBP21.07■□□□□ 0.96
CNN2-207ENST00000565096 LAMC3Q9Y6N6 1575 aa20.94■□□□□ 0.94
CNN2-207ENST00000565096 TOP2AP11388 1531 aaKnown RBP20.94■□□□□ 0.94
CNN2-207ENST00000565096 NESP48681 1621 aa20.94■□□□□ 0.94
CNN2-207ENST00000565096 ERCC6Q03468 1493 aa20.83■□□□□ 0.92
CNN2-207ENST00000565096 KIF21AQ7Z4S6 1674 aa20.78■□□□□ 0.92
CNN2-207ENST00000565096 CADPSQ9ULU8 1353 aa20.77■□□□□ 0.92
CNN2-207ENST00000565096 CUX2O14529 1486 aa20.77■□□□□ 0.91
CNN2-207ENST00000565096 THOC2Q8NI27 1593 aaKnown RBP20.75■□□□□ 0.91
CNN2-207ENST00000565096 PDS5BQ9NTI5 1447 aa20.72■□□□□ 0.91
CNN2-207ENST00000565096 CFTRP13569 1480 aa20.69■□□□□ 0.9
CNN2-207ENST00000565096 PRDM2Q13029 1718 aa20.67■□□□□ 0.9
CNN2-207ENST00000565096 CCDC88BA6NC98 1476 aa20.63■□□□□ 0.89
CNN2-207ENST00000565096 MRC2Q9UBG0 1479 aa20.56■□□□□ 0.88
CNN2-207ENST00000565096 FANCD2Q9BXW9 1451 aa20.55■□□□□ 0.88
CNN2-207ENST00000565096 WDR62O43379 1518 aa20.55■□□□□ 0.88
CNN2-207ENST00000565096 CEP164Q9UPV0 1460 aa20.54■□□□□ 0.88
CNN2-207ENST00000565096 CHIC1Q5VXU3 224 aa20.39■□□□□ 0.86
CNN2-207ENST00000565096 URB2Q14146 1524 aaKnown RBP20.39■□□□□ 0.85
CNN2-207ENST00000565096 TOPBP1Q92547 1522 aa20.25■□□□□ 0.83
CNN2-207ENST00000565096 DNMBPQ6XZF7 1577 aa20.24■□□□□ 0.83
CNN2-207ENST00000565096 ABCC8Q09428 1581 aa20.23■□□□□ 0.83
CNN2-207ENST00000565096 DNAJC5Q9H3Z4 198 aa20.15■□□□□ 0.82
CNN2-207ENST00000565096 IFT140Q96RY7 1462 aa20.13■□□□□ 0.81
CNN2-207ENST00000565096 TARBP1Q13395 1621 aaKnown RBP20.1■□□□□ 0.81
CNN2-207ENST00000565096 CUX1P39880 1505 aa20.07■□□□□ 0.8
CNN2-207ENST00000565096 TRIM41Q8WV44 630 aa20.06■□□□□ 0.8
CNN2-207ENST00000565096 POLA1P09884 1462 aaPredicted RBP20.06■□□□□ 0.8
CNN2-207ENST00000565096 ZNF608Q9ULD9 1512 aaPredicted RBP20.03■□□□□ 0.8
CNN2-207ENST00000565096 EIF4G3O43432 1585 aaKnown RBP20.01■□□□□ 0.79
CNN2-207ENST00000565096 FGD5Q6ZNL6 1462 aa19.98■□□□□ 0.79
CNN2-207ENST00000565096 WDR97A6NE52 1622 aa19.97■□□□□ 0.79
CNN2-207ENST00000565096 BIVM-ERCC5R4GMW8 1640 aa19.94■□□□□ 0.78
CNN2-207ENST00000565096 RAD54L2Q9Y4B4 1467 aa19.92■□□□□ 0.78
CNN2-207ENST00000565096 SOGA1O94964 1423 aa19.91■□□□□ 0.78
CNN2-207ENST00000565096 TOP2BQ02880 1626 aa19.89■□□□□ 0.78
CNN2-207ENST00000565096 SYNJ1O43426 1573 aa19.87■□□□□ 0.77
CNN2-207ENST00000565096 AQRO60306 1485 aaKnown RBP eCLIP19.85■□□□□ 0.771e-6■■■□□ 18.2
CNN2-207ENST00000565096 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
CNN2-207ENST00000565096 FAM9AQ8IZU1 332 aaPredicted RBP19.83■□□□□ 0.77
CNN2-207ENST00000565096 ABCA10Q8WWZ4 1543 aa19.82■□□□□ 0.76
CNN2-207ENST00000565096 ABCA5Q8WWZ7 1642 aa19.81■□□□□ 0.76
CNN2-207ENST00000565096 CHD1O14646 1710 aa19.8■□□□□ 0.76
CNN2-207ENST00000565096 PBRM1Q86U86 1689 aa19.79■□□□□ 0.76
CNN2-207ENST00000565096 TDRD9Q8NDG6 1382 aaKnown RBP19.78■□□□□ 0.76
CNN2-207ENST00000565096 GRIN2BQ13224 1484 aa19.73■□□□□ 0.75
CNN2-207ENST00000565096 OSCARQ8IYS5 282 aa19.73■□□□□ 0.75
CNN2-207ENST00000565096 MAGI1Q96QZ7 1491 aaPredicted RBP19.73■□□□□ 0.75
CNN2-207ENST00000565096 LOC105371045A0A1W2PR82 267 aa19.72■□□□□ 0.75
CNN2-207ENST00000565096 SNAPC4Q5SXM2 1469 aa19.71■□□□□ 0.75
CNN2-207ENST00000565096 GAPVD1Q14C86 1478 aa19.71■□□□□ 0.75
CNN2-207ENST00000565096 EHMT2Q96KQ7 1210 aa19.66■□□□□ 0.74
CNN2-207ENST00000565096 SYNJ2O15056 1496 aa19.64■□□□□ 0.73
CNN2-207ENST00000565096 ADAMTS12P58397 1594 aa19.6■□□□□ 0.73
CNN2-207ENST00000565096 CLASP1Q7Z460 1538 aa19.59■□□□□ 0.73
CNN2-207ENST00000565096 ERICH3Q5RHP9 1530 aa19.59■□□□□ 0.73
CNN2-207ENST00000565096 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.72
CNN2-207ENST00000565096 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.72
CNN2-207ENST00000565096 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.72
CNN2-207ENST00000565096 RUSC2Q8N2Y8 1516 aa19.58■□□□□ 0.72
CNN2-207ENST00000565096 ARHGEF11O15085 1522 aa19.53■□□□□ 0.72
CNN2-207ENST00000565096 GRIN2AQ12879 1464 aa19.5■□□□□ 0.71
CNN2-207ENST00000565096 FHAD1B1AJZ9 1412 aa19.49■□□□□ 0.71
CNN2-207ENST00000565096 FBLN2P98095 1184 aa19.49■□□□□ 0.71
CNN2-207ENST00000565096 CHMP7Q8WUX9 453 aaPredicted RBP19.48■□□□□ 0.71
CNN2-207ENST00000565096 CSRNP3Q8WYN3 585 aa19.45■□□□□ 0.7
CNN2-207ENST00000565096 NUP160Q12769 1436 aa19.44■□□□□ 0.7
CNN2-207ENST00000565096 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
CNN2-207ENST00000565096 CUL7Q14999 1698 aa19.42■□□□□ 0.7
CNN2-207ENST00000565096 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
CNN2-207ENST00000565096 ARAP1Q96P48 1450 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms