Protein–RNA interactions for Protein: O13535

TY1B-H, Transposon Ty1-H Gag-Pol polyprotein, yeastyeast

Predictions only

Length 1,793 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-HO13535 GSY2YLR258W 2118 nt6.79□□□□□ -1.32
TY1B-HO13535 QCR2YPR191W 1107 nt6.79□□□□□ -1.32
TY1B-HO13535 KRE29YER038C 1395 nt6.79□□□□□ -1.32
TY1B-HO13535 YBR284WYBR284W 2394 nt6.78□□□□□ -1.32
TY1B-HO13535 EGT2YNL327W 3126 nt6.78□□□□□ -1.32
TY1B-HO13535 YPR059CYPR059C 387 nt6.78□□□□□ -1.32
TY1B-HO13535 HEL1YKR017C 1656 nt6.77□□□□□ -1.32
TY1B-HO13535 CMK2YOL016C 1344 nt6.77□□□□□ -1.33
TY1B-HO13535 RCK2YLR248W 1833 nt6.77□□□□□ -1.33
TY1B-HO13535 ELP2YGR200C 2367 nt6.77□□□□□ -1.33
TY1B-HO13535 EPS1YIL005W 2106 nt6.77□□□□□ -1.33
TY1B-HO13535 MRPL3YMR024W 1173 nt6.77□□□□□ -1.33
TY1B-HO13535 MET16YPR167C 786 nt6.77□□□□□ -1.33
TY1B-HO13535 SIA1YOR137C 1869 nt6.77□□□□□ -1.33
TY1B-HO13535 TNA1YGR260W 1605 nt6.76□□□□□ -1.33
TY1B-HO13535 NOG2YNR053C 1461 nt6.76□□□□□ -1.33
TY1B-HO13535 ARG82YDR173C 1068 nt6.76□□□□□ -1.33
TY1B-HO13535 YPR109WYPR109W 885 nt6.76□□□□□ -1.33
TY1B-HO13535 FRS1YLR060W 1788 nt6.76□□□□□ -1.33
TY1B-HO13535 YIL055CYIL055C 1884 nt6.75□□□□□ -1.33
TY1B-HO13535 RPL12AYEL054C 498 nt6.74□□□□□ -1.33
TY1B-HO13535 RMI1YPL024W 726 nt6.74□□□□□ -1.33
TY1B-HO13535 KIN2YLR096W 3444 nt6.74□□□□□ -1.33
TY1B-HO13535 RPS14AYCR031C 414 nt6.74□□□□□ -1.33
TY1B-HO13535 YDR282CYDR282C 1245 nt6.74□□□□□ -1.33
TY1B-HO13535 COX4YGL187C 468 nt6.73□□□□□ -1.33
TY1B-HO13535 IGO2YHR132W-A 396 nt6.72□□□□□ -1.33
TY1B-HO13535 FLC1YPL221W 2382 nt6.72□□□□□ -1.33
TY1B-HO13535 RVB1YDR190C 1392 nt6.72□□□□□ -1.33
TY1B-HO13535 ERG20YJL167W 1059 nt6.72□□□□□ -1.33
TY1B-HO13535 YJR096WYJR096W 849 nt6.72□□□□□ -1.33
TY1B-HO13535 CNB1YKL190W 528 nt6.72□□□□□ -1.33
TY1B-HO13535 SMC5YOL034W 3282 nt6.71□□□□□ -1.34
TY1B-HO13535 FMP46YKR049C 402 nt6.71□□□□□ -1.34
TY1B-HO13535 RPB7YDR404C 516 nt6.7□□□□□ -1.34
TY1B-HO13535 CDC12YHR107C 1224 nt6.7□□□□□ -1.34
TY1B-HO13535 MCM6YGL201C 3054 nt6.7□□□□□ -1.34
TY1B-HO13535 LAG2YOL025W 1983 nt6.7□□□□□ -1.34
TY1B-HO13535 RRB1YMR131C 1536 nt6.7□□□□□ -1.34
TY1B-HO13535 MIC26YGR235C 702 nt6.69□□□□□ -1.34
TY1B-HO13535 COQ4YDR204W 1008 nt6.69□□□□□ -1.34
TY1B-HO13535 NCS6YGL211W 1080 nt6.69□□□□□ -1.34
TY1B-HO13535 DSS4YPR017C 432 nt6.69□□□□□ -1.34
TY1B-HO13535 GDB1YPR184W 4611 nt6.68□□□□□ -1.34
TY1B-HO13535 TPK1YJL164C 1194 nt6.68□□□□□ -1.34
TY1B-HO13535 LSO1YJR005C-A 282 nt6.68□□□□□ -1.34
TY1B-HO13535 NTR2YKR022C 969 nt6.68□□□□□ -1.34
TY1B-HO13535 MRS2YOR334W 1413 nt6.68□□□□□ -1.34
TY1B-HO13535 VHS2YIL135C 1311 nt6.68□□□□□ -1.34
TY1B-HO13535 SSL1YLR005W 1386 nt6.67□□□□□ -1.34
TY1B-HO13535 YNL194CYNL194C 906 nt6.67□□□□□ -1.34
TY1B-HO13535 RSA4YCR072C 1548 nt6.67□□□□□ -1.34
TY1B-HO13535 EFT2YDR385W 2529 nt6.66□□□□□ -1.34
TY1B-HO13535 EFT1YOR133W 2529 nt6.66□□□□□ -1.34
TY1B-HO13535 STE20YHL007C 2820 nt6.66□□□□□ -1.34
TY1B-HO13535 YEL077CYEL077C 3834 nt6.66□□□□□ -1.34
TY1B-HO13535 ATG22YCL038C 1587 nt6.66□□□□□ -1.34
TY1B-HO13535 GCR1YPL075W 2358 nt6.66□□□□□ -1.34
TY1B-HO13535 FUR1YHR128W 651 nt6.65□□□□□ -1.34
TY1B-HO13535 MCM1YMR043W 861 nt6.65□□□□□ -1.34
TY1B-HO13535 YCL012CYCL012C 405 nt6.65□□□□□ -1.34
TY1B-HO13535 UGA1YGR019W 1416 nt6.65□□□□□ -1.35
TY1B-HO13535 YDL032WYDL032W 312 nt6.64□□□□□ -1.35
TY1B-HO13535 YFT2YDR319C 825 nt6.64□□□□□ -1.35
TY1B-HO13535 SUR2YDR297W 1050 nt6.64□□□□□ -1.35
TY1B-HO13535 DPH1YIL103W 1278 nt6.64□□□□□ -1.35
TY1B-HO13535 MAK3YPR051W 531 nt6.64□□□□□ -1.35
TY1B-HO13535 SYP1YCR030C 2613 nt6.63□□□□□ -1.35
TY1B-HO13535 SPO19YPL130W 672 nt6.63□□□□□ -1.35
TY1B-HO13535 JHD2YJR119C 2187 nt6.63□□□□□ -1.35
TY1B-HO13535 ZPR1YGR211W 1461 nt6.63□□□□□ -1.35
TY1B-HO13535 ACS1YAL054C 2142 nt6.62□□□□□ -1.35
TY1B-HO13535 CAF16YFL028C 870 nt6.62□□□□□ -1.35
TY1B-HO13535 OTU1YFL044C 906 nt6.62□□□□□ -1.35
TY1B-HO13535 CWC25YNL245C 540 nt6.62□□□□□ -1.35
TY1B-HO13535 CWC2YDL209C 1020 nt6.61□□□□□ -1.35
TY1B-HO13535 RSC58YLR033W 1509 nt6.61□□□□□ -1.35
TY1B-HO13535 SSY5YJL156C 2100 nt6.59□□□□□ -1.35
TY1B-HO13535 PUS5YLR165C 765 nt6.59□□□□□ -1.35
TY1B-HO13535 SPC105YGL093W 2754 nt6.59□□□□□ -1.35
TY1B-HO13535 DAL7YIR031C 1665 nt6.59□□□□□ -1.35
TY1B-HO13535 YPL245WYPL245W 1365 nt6.59□□□□□ -1.35
TY1B-HO13535 POP1YNL221C 2628 nt6.58□□□□□ -1.36
TY1B-HO13535 PWP1YLR196W 1731 nt6.57□□□□□ -1.36
TY1B-HO13535 YDR445CYDR445C 408 nt6.57□□□□□ -1.36
TY1B-HO13535 RML2YEL050C 1182 nt6.57□□□□□ -1.36
TY1B-HO13535 AIM26YKL037W 357 nt6.57□□□□□ -1.36
TY1B-HO13535 HXT2YMR011W 1626 nt6.57□□□□□ -1.36
TY1B-HO13535 LTV1YKL143W 1392 nt6.57□□□□□ -1.36
TY1B-HO13535 RMD9YGL107C 1941 nt6.57□□□□□ -1.36
TY1B-HO13535 YLR407WYLR407W 687 nt6.57□□□□□ -1.36
TY1B-HO13535 RAD28YDR030C 1521 nt6.56□□□□□ -1.36
TY1B-HO13535 YMR221CYMR221C 1515 nt6.56□□□□□ -1.36
TY1B-HO13535 HES1YOR237W 1305 nt6.56□□□□□ -1.36
TY1B-HO13535 YEL067CYEL067C 588 nt6.56□□□□□ -1.36
TY1B-HO13535 MBR1YKL093W 1020 nt6.56□□□□□ -1.36
TY1B-HO13535 CSR1YLR380W 1227 nt6.56□□□□□ -1.36
TY1B-HO13535 RNR3YIL066C 2610 nt6.56□□□□□ -1.36
TY1B-HO13535 AGA1YNR044W 2178 nt6.55□□□□□ -1.36
TY1B-HO13535 CAB3YKL088W 1716 nt6.55□□□□□ -1.36
Retrieved 100 of 7,029 protein–RNA pairs in 34.8 ms