Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC131274.2-201ENST00000580697 1507 ntBASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC012676.1-201ENST00000574705 1949 ntBASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MIR4281-201ENST00000580852 62 ntBASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC18.69■□□□□ 0.58
SAA2-SAA4A0A096LPE2 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MIR4508-201ENST00000584178 70 ntBASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
SAA2-SAA4A0A096LPE2 C6orf201-202ENST00000380175 1834 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KLC1-201ENST00000246489 2294 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KLC1-224ENST00000557450 2265 ntTSL 5 BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
SAA2-SAA4A0A096LPE2 KRT8P33-201ENST00000508125 1423 ntBASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 EI24-213ENST00000618552 1747 ntTSL 5 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ERO1A-211ENST00000629528 998 ntTSL 5 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AF117829.1-207ENST00000504145 1572 ntTSL 3 BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SLC10A4-201ENST00000273861 1790 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 DUSP8P5-201ENST00000422884 1815 ntBASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AF131216.4-201ENST00000638924 1588 ntBASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AGAP3-201ENST00000335367 2675 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC18.65■□□□□ 0.58
SAA2-SAA4A0A096LPE2 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SAA2-SAA4A0A096LPE2 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.58
SAA2-SAA4A0A096LPE2 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
SAA2-SAA4A0A096LPE2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SAA2-SAA4A0A096LPE2 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AC103834.1-201ENST00000520383 144 ntBASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 NRL-202ENST00000396997 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SAA2-SAA4A0A096LPE2 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 YBX1P4-201ENST00000392794 808 ntBASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 LBH-205ENST00000407930 756 ntTSL 2 BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 CCDC154-201ENST00000389176 2212 ntAPPRIS P5 TSL 5 BASIC18.63■□□□□ 0.57
SAA2-SAA4A0A096LPE2 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SAA2-SAA4A0A096LPE2 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms