Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 SYT6-210ENST00000641643 1587 ntBASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC25.6■■□□□ 1.69
SCN10AQ9Y5Y9 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 HYI-206ENST00000372434 1025 ntTSL 5 BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC25.59■■□□□ 1.69
SCN10AQ9Y5Y9 IRF3-227ENST00000600911 1637 ntTSL 5 BASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 STK32C-205ENST00000456004 607 ntTSL 2 BASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 MIR4767-201ENST00000582827 78 ntBASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 AC011298.3-201ENST00000615796 283 ntBASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 C17orf82-201ENST00000623772 1530 ntBASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 AC104564.3-201ENST00000582367 638 ntBASIC25.58■■□□□ 1.69
SCN10AQ9Y5Y9 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.58■■□□□ 1.68
SCN10AQ9Y5Y9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC25.57■■□□□ 1.68
SCN10AQ9Y5Y9 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC25.56■■□□□ 1.68
SCN10AQ9Y5Y9 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC25.56■■□□□ 1.68
SCN10AQ9Y5Y9 MIR5787-201ENST00000611784 55 ntBASIC25.56■■□□□ 1.68
SCN10AQ9Y5Y9 DLX2-202ENST00000466293 1852 ntTSL 2 BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 AC091305.1-201ENST00000479476 895 ntBASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 MAG-206ENST00000597035 542 ntTSL 4 BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC25.55■■□□□ 1.68
SCN10AQ9Y5Y9 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.54■■□□□ 1.68
SCN10AQ9Y5Y9 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC25.54■■□□□ 1.68
SCN10AQ9Y5Y9 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC25.54■■□□□ 1.68
SCN10AQ9Y5Y9 RASA4CP-201ENST00000424092 1398 ntBASIC25.54■■□□□ 1.68
SCN10AQ9Y5Y9 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
SCN10AQ9Y5Y9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 NKX2-2-AS1-201ENST00000549659 638 ntTSL 5 BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 AC009102.2-201ENST00000606772 1639 ntBASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 AC099791.2-201ENST00000605725 427 ntBASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC25.53■■□□□ 1.68
SCN10AQ9Y5Y9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 AL138724.1-201ENST00000606771 1088 ntBASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
SCN10AQ9Y5Y9 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 AC093249.6-202ENST00000568500 1142 ntTSL 2 BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 CA15P2-201ENST00000611168 834 ntBASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC25.51■■□□□ 1.67
SCN10AQ9Y5Y9 CBWD3-213ENST00000618217 1611 ntTSL 1 (best) BASIC25.5■■□□□ 1.67
SCN10AQ9Y5Y9 AC027682.1-201ENST00000562846 899 ntBASIC25.5■■□□□ 1.67
SCN10AQ9Y5Y9 SLC35A3-216ENST00000639221 1032 ntTSL 5 BASIC25.5■■□□□ 1.67
SCN10AQ9Y5Y9 DUSP8P4-201ENST00000399538 1761 ntBASIC25.5■■□□□ 1.67
SCN10AQ9Y5Y9 PRSS22-203ENST00000571228 1037 ntTSL 2 BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 AC092171.4-201ENST00000609130 632 ntBASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 AC097381.1-201ENST00000429019 1296 ntBASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 STOX2-205ENST00000513034 807 ntTSL 3 BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 MIR6821-201ENST00000617625 74 ntBASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC25.49■■□□□ 1.67
SCN10AQ9Y5Y9 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC25.48■■□□□ 1.67
SCN10AQ9Y5Y9 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC25.47■■□□□ 1.67
SCN10AQ9Y5Y9 CEP104-201ENST00000378223 1121 ntTSL 1 (best) BASIC25.47■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms