Protein–RNA interactions for Protein: Q9H321

VCX3B, Variable charge X-linked protein 3B, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3BQ9H321 FOXO3B-201ENST00000395675 1928 ntBASIC21.88■■□□□ 1.09
VCX3BQ9H321 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC21.88■■□□□ 1.09
VCX3BQ9H321 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC21.87■■□□□ 1.09
VCX3BQ9H321 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC21.87■■□□□ 1.09
VCX3BQ9H321 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.87■■□□□ 1.09
VCX3BQ9H321 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.87■■□□□ 1.09
VCX3BQ9H321 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 MRPL4-201ENST00000253099 1455 ntAPPRIS P2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.87■■□□□ 1.09
VCX3BQ9H321 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC21.87■■□□□ 1.09
VCX3BQ9H321 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 CAHM-201ENST00000604200 896 ntBASIC21.86■■□□□ 1.09
VCX3BQ9H321 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 FKBP8-209ENST00000597960 1781 ntAPPRIS P3 TSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.86■■□□□ 1.09
VCX3BQ9H321 LAT-201ENST00000354453 1713 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC21.86■■□□□ 1.09
VCX3BQ9H321 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.85■■□□□ 1.09
VCX3BQ9H321 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC21.85■■□□□ 1.09
VCX3BQ9H321 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC21.85■■□□□ 1.09
VCX3BQ9H321 AC007375.3-201ENST00000600936 2314 ntBASIC21.85■■□□□ 1.09
VCX3BQ9H321 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC21.85■■□□□ 1.09
VCX3BQ9H321 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC21.84■■□□□ 1.09
VCX3BQ9H321 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
VCX3BQ9H321 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC21.84■■□□□ 1.09
VCX3BQ9H321 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC21.84■■□□□ 1.09
VCX3BQ9H321 TBX1-202ENST00000332710 2084 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
VCX3BQ9H321 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
VCX3BQ9H321 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 LSR-203ENST00000360798 1963 ntTSL 2 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC21.83■■□□□ 1.09
VCX3BQ9H321 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
VCX3BQ9H321 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 FUT11-201ENST00000372841 2056 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
VCX3BQ9H321 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC21.82■■□□□ 1.08
VCX3BQ9H321 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.81■■□□□ 1.08
VCX3BQ9H321 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
VCX3BQ9H321 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC21.81■■□□□ 1.08
VCX3BQ9H321 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
VCX3BQ9H321 RBPJL-202ENST00000372741 1636 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VCX3BQ9H321 LMLN-210ENST00000482695 2010 ntAPPRIS ALT2 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCX3BQ9H321 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC21.8■■□□□ 1.08
VCX3BQ9H321 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VCX3BQ9H321 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
VCX3BQ9H321 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.8■■□□□ 1.08
VCX3BQ9H321 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
VCX3BQ9H321 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC21.79■■□□□ 1.08
VCX3BQ9H321 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
VCX3BQ9H321 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.79■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 76.9 ms