Protein–RNA interactions for Protein: Q8TE82

SH3TC1, SH3 domain and tetratricopeptide repeat-containing protein 1, humanhuman

Predictions only

Length 1,336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1Q8TE82 AC024257.2-201ENST00000549699 147 ntBASIC28.88■■■□□ 2.21
SH3TC1Q8TE82 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC28.88■■■□□ 2.21
SH3TC1Q8TE82 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 APOE-201ENST00000252486 1208 ntAPPRIS P1 TSL 1 (best) BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 SUDS3P1-201ENST00000505831 966 ntBASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 OSCAR-203ENST00000356532 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC28.87■■■□□ 2.21
SH3TC1Q8TE82 RFWD2-201ENST00000308769 2124 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 SMIM29-205ENST00000468145 903 ntTSL 2 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 SMIM29-207ENST00000481533 1053 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC28.86■■■□□ 2.21
SH3TC1Q8TE82 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 EPDR1-202ENST00000423717 638 ntTSL 1 (best) BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC28.85■■■□□ 2.21
SH3TC1Q8TE82 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 LSR-205ENST00000427250 1606 ntTSL 2 BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 RPUSD1-201ENST00000007264 2050 ntAPPRIS P1 TSL 2 BASIC28.84■■■□□ 2.21
SH3TC1Q8TE82 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 GUK1-205ENST00000366722 850 ntTSL 3 BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 ZNRF2P3-201ENST00000424200 374 ntBASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 AL022069.1-201ENST00000568025 1636 ntBASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC28.83■■■□□ 2.21
SH3TC1Q8TE82 EDA-201ENST00000338901 1233 ntBASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 TGFBR3L-202ENST00000565886 1260 ntAPPRIS P1 TSL 5 BASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 FAM220A-206ENST00000616824 2211 ntTSL 1 (best) BASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 SP5-201ENST00000375281 2033 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
SH3TC1Q8TE82 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 CNPY3-202ENST00000394142 954 ntTSL 5 BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 CLPSL2-202ENST00000403376 405 ntAPPRIS P3 TSL 1 (best) BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 DUX4L19-201ENST00000557448 1267 ntBASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC28.81■■■□□ 2.2
SH3TC1Q8TE82 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC28.8■■■□□ 2.2
SH3TC1Q8TE82 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 ZNF503-AS2-202ENST00000466942 1430 ntTSL 2 BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 AL355001.2-201ENST00000620617 1191 ntBASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 SLC25A1-201ENST00000215882 1648 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC28.79■■■□□ 2.2
SH3TC1Q8TE82 SEPT5-201ENST00000383045 1588 ntTSL 5 BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 CLPSL2-201ENST00000360454 488 ntAPPRIS ALT2 TSL 1 (best) BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 SF1-220ENST00000626028 704 ntTSL 2 BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC28.78■■■□□ 2.2
SH3TC1Q8TE82 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SH3TC1Q8TE82 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
SH3TC1Q8TE82 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC28.77■■■□□ 2.2
SH3TC1Q8TE82 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC28.77■■■□□ 2.2
SH3TC1Q8TE82 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC28.76■■■□□ 2.2
SH3TC1Q8TE82 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SH3TC1Q8TE82 FBXO33-202ENST00000554190 534 ntTSL 3 BASIC28.76■■■□□ 2.19
SH3TC1Q8TE82 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC28.76■■■□□ 2.19
SH3TC1Q8TE82 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC28.76■■■□□ 2.19
SH3TC1Q8TE82 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC28.76■■■□□ 2.19
SH3TC1Q8TE82 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
SH3TC1Q8TE82 AC092171.4-201ENST00000609130 632 ntBASIC28.75■■■□□ 2.19
SH3TC1Q8TE82 SYT8-201ENST00000341958 1556 ntAPPRIS ALT2 TSL 5 BASIC28.75■■■□□ 2.19
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms