Protein–RNA interactions for Protein: Q86VV8

RTTN, Rotatin, humanhuman

Predictions only

Length 2,226 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTTNQ86VV8 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC20.19■□□□□ 0.82
RTTNQ86VV8 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTTNQ86VV8 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTTNQ86VV8 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC20.19■□□□□ 0.82
RTTNQ86VV8 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
RTTNQ86VV8 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC20.19■□□□□ 0.82
RTTNQ86VV8 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC20.19■□□□□ 0.82
RTTNQ86VV8 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 MIR6089-201ENST00000616698 64 ntBASIC20.18■□□□□ 0.82
RTTNQ86VV8 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 AL160276.1-201ENST00000636672 1312 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 KCNIP1-203ENST00000390656 2249 ntTSL 5 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
RTTNQ86VV8 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RTTNQ86VV8 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 PPP4C-214ENST00000627746 1301 ntTSL 5 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RTTNQ86VV8 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 HLA-L-211ENST00000482052 1765 ntBASIC20.17■□□□□ 0.82
RTTNQ86VV8 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC20.17■□□□□ 0.82
RTTNQ86VV8 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTTNQ86VV8 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.16■□□□□ 0.82
RTTNQ86VV8 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTTNQ86VV8 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RTTNQ86VV8 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RTTNQ86VV8 AC009163.4-201ENST00000567194 530 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
RTTNQ86VV8 Z92544.1-202ENST00000571933 1220 ntBASIC20.16■□□□□ 0.82
RTTNQ86VV8 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC20.16■□□□□ 0.82
RTTNQ86VV8 AC011551.1-201ENST00000614101 683 ntBASIC20.16■□□□□ 0.82
RTTNQ86VV8 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC20.16■□□□□ 0.82
RTTNQ86VV8 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 AC092666.2-201ENST00000613287 246 ntBASIC20.15■□□□□ 0.82
RTTNQ86VV8 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RTTNQ86VV8 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 SENP5-202ENST00000419026 973 ntTSL 3 BASIC20.15■□□□□ 0.82
RTTNQ86VV8 PEMT-206ENST00000435340 960 ntTSL 5 BASIC20.15■□□□□ 0.82
RTTNQ86VV8 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC20.15■□□□□ 0.82
RTTNQ86VV8 CASK-201ENST00000378154 2494 ntTSL 5 BASIC20.15■□□□□ 0.82
RTTNQ86VV8 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RTTNQ86VV8 ATAD3A-203ENST00000378756 2492 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTTNQ86VV8 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
RTTNQ86VV8 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.14■□□□□ 0.82
RTTNQ86VV8 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RTTNQ86VV8 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTTNQ86VV8 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
RTTNQ86VV8 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC20.14■□□□□ 0.81
RTTNQ86VV8 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.14■□□□□ 0.81
RTTNQ86VV8 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.14■□□□□ 0.81
RTTNQ86VV8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RTTNQ86VV8 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTTNQ86VV8 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC20.14■□□□□ 0.81
RTTNQ86VV8 AC239859.2-201ENST00000444165 318 ntBASIC20.14■□□□□ 0.81
RTTNQ86VV8 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RTTNQ86VV8 PRELID1-201ENST00000303204 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTTNQ86VV8 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
RTTNQ86VV8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
RTTNQ86VV8 RALB-208ENST00000631312 311 ntTSL 5 BASIC20.13■□□□□ 0.81
RTTNQ86VV8 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC20.13■□□□□ 0.81
RTTNQ86VV8 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTTNQ86VV8 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC20.13■□□□□ 0.81
RTTNQ86VV8 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RTTNQ86VV8 LINC01925-201ENST00000579492 500 ntTSL 5 BASIC20.12■□□□□ 0.81
RTTNQ86VV8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTTNQ86VV8 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC20.12■□□□□ 0.81
RTTNQ86VV8 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTTNQ86VV8 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTTNQ86VV8 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC20.12■□□□□ 0.81
RTTNQ86VV8 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RTTNQ86VV8 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC20.12■□□□□ 0.81
RTTNQ86VV8 PPP1R14A-205ENST00000591585 949 ntTSL 2 BASIC20.12■□□□□ 0.81
RTTNQ86VV8 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RTTNQ86VV8 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 124.2 ms