Protein–RNA interactions for Protein: Q07807

PUF3, mRNA-binding protein PUF3, yeastyeast

Known RBP RIP-Chip data

Length 879 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PUF3Q07807 COR1YBL045C 1374 nt6.34□□□□□ -1.39
PUF3Q07807 PXL1YKR090W 2121 nt6.34□□□□□ -1.39
PUF3Q07807 RAP1YNL216W 2484 nt6.34□□□□□ -1.39
PUF3Q07807 YDR249CYDR249C 1122 nt6.34□□□□□ -1.39
PUF3Q07807 YGR026WYGR026W 837 nt6.34□□□□□ -1.39
PUF3Q07807 CIR1YGR207C 786 nt6.34□□□□□ -1.39
PUF3Q07807 YLR156WYLR156W 345 nt6.34□□□□□ -1.39
PUF3Q07807 YLR157W-DYLR157W-D 213 nt6.34□□□□□ -1.39
PUF3Q07807 YLR159WYLR159W 345 nt6.34□□□□□ -1.39
PUF3Q07807 YLR161WYLR161W 345 nt6.34□□□□□ -1.39
PUF3Q07807 YLR184WYLR184W 348 nt6.34□□□□□ -1.39
PUF3Q07807 YML018CYML018C 1182 nt6.34□□□□□ -1.39
PUF3Q07807 HAP3YBL021C 435 nt6.34□□□□□ -1.39
PUF3Q07807 YML083CYML083C 1257 nt6.34□□□□□ -1.39 RIP-Chip
PUF3Q07807 YPR114WYPR114W 948 nt6.34□□□□□ -1.39
PUF3Q07807 POP1YNL221C 2628 nt6.34□□□□□ -1.39
PUF3Q07807 GUF1YLR289W 1938 nt6.33□□□□□ -1.4 RIP-Chip
PUF3Q07807 GCN5YGR252W 1320 nt6.33□□□□□ -1.4
PUF3Q07807 SRO9YCL037C 1305 nt6.33□□□□□ -1.4
PUF3Q07807 YDL218WYDL218W 954 nt6.33□□□□□ -1.4
PUF3Q07807 IRC22YEL001C 678 nt6.33□□□□□ -1.4
PUF3Q07807 MTC7YEL033W 420 nt6.33□□□□□ -1.4
PUF3Q07807 PRE1YER012W 597 nt6.33□□□□□ -1.4
PUF3Q07807 SFK1YKL051W 1062 nt6.33□□□□□ -1.4
PUF3Q07807 RCN1YKL159C 636 nt6.33□□□□□ -1.4
PUF3Q07807 SMD3YLR147C 306 nt6.33□□□□□ -1.4
PUF3Q07807 SNN1YNL086W 309 nt6.33□□□□□ -1.4
PUF3Q07807 SME1YOR159C 285 nt6.33□□□□□ -1.4 RIP-Chip
PUF3Q07807 SNF8YPL002C 702 nt6.33□□□□□ -1.4
PUF3Q07807 YPL014WYPL014W 1146 nt6.33□□□□□ -1.4
PUF3Q07807 VRP1YLR337C 2454 nt6.33□□□□□ -1.4
PUF3Q07807 UTP4YDR324C 2331 nt6.32□□□□□ -1.4
PUF3Q07807 DEF1YKL054C 2217 nt6.32□□□□□ -1.4
PUF3Q07807 YHL018WYHL018W 363 nt6.32□□□□□ -1.4
PUF3Q07807 PML1YLR016C 615 nt6.32□□□□□ -1.4
PUF3Q07807 SPC2YML055W 537 nt6.32□□□□□ -1.4
PUF3Q07807 YNL285WYNL285W 372 nt6.32□□□□□ -1.4
PUF3Q07807 YDR179W-AYDR179W-A 1392 nt6.31□□□□□ -1.4
PUF3Q07807 HST1YOL068C 1512 nt6.31□□□□□ -1.4
PUF3Q07807 YOL036WYOL036W 2286 nt6.31□□□□□ -1.4
PUF3Q07807 RIO1YOR119C 1455 nt6.31□□□□□ -1.4
PUF3Q07807 YDL162CYDL162C 357 nt6.31□□□□□ -1.4
PUF3Q07807 tR(ACG)DtR(ACG)D 73 nt6.31□□□□□ -1.4
PUF3Q07807 tR(ACG)EtR(ACG)E 73 nt6.31□□□□□ -1.4
PUF3Q07807 tR(ACG)KtR(ACG)K 73 nt6.31□□□□□ -1.4
PUF3Q07807 tR(ACG)LtR(ACG)L 73 nt6.31□□□□□ -1.4
PUF3Q07807 tR(ACG)OtR(ACG)O 73 nt6.31□□□□□ -1.4
PUF3Q07807 AIM22YJL046W 1230 nt6.31□□□□□ -1.4
PUF3Q07807 YKL123WYKL123W 381 nt6.31□□□□□ -1.4
PUF3Q07807 EBP2YKL172W 1284 nt6.31□□□□□ -1.4
PUF3Q07807 HRT3YLR097C 1035 nt6.31□□□□□ -1.4
PUF3Q07807 YML6YML025C 861 nt6.31□□□□□ -1.4 RIP-Chip
PUF3Q07807 ROX3YBL093C 663 nt6.31□□□□□ -1.4
PUF3Q07807 RRT2YBR246W 1164 nt6.31□□□□□ -1.4
PUF3Q07807 ATG18YFR021W 1503 nt6.3□□□□□ -1.4
PUF3Q07807 CNE1YAL058W 1509 nt6.3□□□□□ -1.4
PUF3Q07807 PTR2YKR093W 1806 nt6.3□□□□□ -1.4
PUF3Q07807 TIM22YDL217C 624 nt6.3□□□□□ -1.4 RIP-Chip
PUF3Q07807 GAL83YER027C 1254 nt6.3□□□□□ -1.4
PUF3Q07807 MRL1YPR079W 1146 nt6.3□□□□□ -1.4
PUF3Q07807 PWR1PWR1 941 nt6.3□□□□□ -1.4
PUF3Q07807 DBP5YOR046C 1449 nt6.3□□□□□ -1.4
PUF3Q07807 FRS2YFL022C 1512 nt6.3□□□□□ -1.4
PUF3Q07807 ATC1YDR184C 885 nt6.29□□□□□ -1.4
PUF3Q07807 SPT3YDR392W 1014 nt6.29□□□□□ -1.4
PUF3Q07807 MCM3YEL032W 2916 nt6.29□□□□□ -1.4
PUF3Q07807 YGR127WYGR127W 939 nt6.29□□□□□ -1.4
PUF3Q07807 IPI1YHR085W 1005 nt6.29□□□□□ -1.4
PUF3Q07807 IME1YJR094C 1083 nt6.29□□□□□ -1.4
PUF3Q07807 AIM25YJR100C 984 nt6.29□□□□□ -1.4
PUF3Q07807 YOR152CYOR152C 771 nt6.29□□□□□ -1.4
PUF3Q07807 YOR364WYOR364W 369 nt6.29□□□□□ -1.4
PUF3Q07807 STE50YCL032W 1041 nt6.29□□□□□ -1.4
PUF3Q07807 MSN2YMR037C 2115 nt6.29□□□□□ -1.4
PUF3Q07807 ALG1YBR110W 1350 nt6.29□□□□□ -1.4
PUF3Q07807 CLN2YPL256C 1638 nt6.28□□□□□ -1.4
PUF3Q07807 ATG4YNL223W 1485 nt6.28□□□□□ -1.4
PUF3Q07807 YDL124WYDL124W 939 nt6.28□□□□□ -1.4
PUF3Q07807 FYV1YDR024W 486 nt6.28□□□□□ -1.4
PUF3Q07807 HST4YDR191W 1113 nt6.28□□□□□ -1.4
PUF3Q07807 GIM4YEL003W 336 nt6.28□□□□□ -1.4
PUF3Q07807 ACT1YFL039C 1128 nt6.28□□□□□ -1.4
PUF3Q07807 SUP2tY(GUA)D 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP11tY(GUA)F1 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP6tY(GUA)F2 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP7tY(GUA)J1 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP4tY(GUA)J2 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP5tY(GUA)M1 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP8tY(GUA)M2 75 nt6.28□□□□□ -1.4
PUF3Q07807 SUP3tY(GUA)O 75 nt6.28□□□□□ -1.4
PUF3Q07807 YKL169CYKL169C 384 nt6.28□□□□□ -1.4 RIP-Chip
PUF3Q07807 YLR225CYLR225C 1224 nt6.28□□□□□ -1.4
PUF3Q07807 DLT1YMR126C 1029 nt6.28□□□□□ -1.4
PUF3Q07807 YNR040WYNR040W 771 nt6.28□□□□□ -1.4 RIP-Chip
PUF3Q07807 MED4YOR174W 855 nt6.28□□□□□ -1.4
PUF3Q07807 YBR063CYBR063C 1215 nt6.28□□□□□ -1.4
PUF3Q07807 RPN7YPR108W 1290 nt6.28□□□□□ -1.4
PUF3Q07807 NOB1YOR056C 1380 nt6.28□□□□□ -1.4
PUF3Q07807 GUS1YGL245W 2127 nt6.28□□□□□ -1.4
PUF3Q07807 VPS4YPR173C 1314 nt6.27□□□□□ -1.41
Retrieved 100 of 7,029 protein–RNA pairs in 22.4 ms