Protein–RNA interactions for Protein: P41817

CUP9, Homeobox protein CUP9, yeastyeast

Predictions only

Length 306 aa.

Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CUP9P41817 YEF1YEL041W 1488 nt4.37□□□□□ -1.71
CUP9P41817 ARB1YER036C 1833 nt4.37□□□□□ -1.71
CUP9P41817 CTS2YDR371W 1536 nt4.37□□□□□ -1.71
CUP9P41817 APC1YNL172W 5247 nt4.37□□□□□ -1.71
CUP9P41817 CAB1YDR531W 1104 nt4.37□□□□□ -1.71
CUP9P41817 HSP31YDR533C 714 nt4.37□□□□□ -1.71
CUP9P41817 ARP1YHR129C 1155 nt4.37□□□□□ -1.71
CUP9P41817 snR10snR10 245 nt4.37□□□□□ -1.71
CUP9P41817 YPL191CYPL191C 1083 nt4.37□□□□□ -1.71
CUP9P41817 YJR124CYJR124C 1347 nt4.37□□□□□ -1.71
CUP9P41817 ELP2YGR200C 2367 nt4.36□□□□□ -1.71
CUP9P41817 GTO1YGR154C 1071 nt4.36□□□□□ -1.71
CUP9P41817 CTR3YLR411W 726 nt4.36□□□□□ -1.71
CUP9P41817 CKA2YOR061W 1020 nt4.36□□□□□ -1.71
CUP9P41817 SAF1YBR280C 1914 nt4.36□□□□□ -1.71
CUP9P41817 MMT2YPL224C 1455 nt4.36□□□□□ -1.71
CUP9P41817 YJR085CYJR085C 318 nt4.35□□□□□ -1.71
CUP9P41817 AIF1YNR074C 1137 nt4.35□□□□□ -1.71
CUP9P41817 MDY2YOL111C 639 nt4.35□□□□□ -1.71
CUP9P41817 DCI1YOR180C 816 nt4.35□□□□□ -1.71
CUP9P41817 DEF1YKL054C 2217 nt4.35□□□□□ -1.71
CUP9P41817 BUD7YOR299W 2241 nt4.35□□□□□ -1.71
CUP9P41817 IMA1YGR287C 1770 nt4.35□□□□□ -1.71
CUP9P41817 HXT5YHR096C 1779 nt4.35□□□□□ -1.71
CUP9P41817 YDL121CYDL121C 450 nt4.34□□□□□ -1.71
CUP9P41817 MDG1YNL173C 1101 nt4.34□□□□□ -1.71
CUP9P41817 ZPS1YOL154W 750 nt4.34□□□□□ -1.71
CUP9P41817 UBA3YPR066W 900 nt4.34□□□□□ -1.71
CUP9P41817 GRS1YBR121C 2004 nt4.34□□□□□ -1.71
CUP9P41817 TUL1YKL034W 2277 nt4.34□□□□□ -1.72
CUP9P41817 SWI3YJL176C 2478 nt4.34□□□□□ -1.72
CUP9P41817 UBA2YDR390C 1911 nt4.33□□□□□ -1.72
CUP9P41817 NSI1YDR026C 1713 nt4.33□□□□□ -1.72
CUP9P41817 UGA1YGR019W 1416 nt4.33□□□□□ -1.72
CUP9P41817 GRX4YER174C 735 nt4.33□□□□□ -1.72
CUP9P41817 APS1YLR170C 471 nt4.33□□□□□ -1.72
CUP9P41817 COX11YPL132W 903 nt4.33□□□□□ -1.72
CUP9P41817 YMR102CYMR102C 2505 nt4.33□□□□□ -1.72
CUP9P41817 PMT2YAL023C 2280 nt4.33□□□□□ -1.72
CUP9P41817 YGL185CYGL185C 1140 nt4.32□□□□□ -1.72
CUP9P41817 MET7YOR241W 1647 nt4.32□□□□□ -1.72
CUP9P41817 BRE2YLR015W 1518 nt4.31□□□□□ -1.72
CUP9P41817 TRS23YDR246W 660 nt4.31□□□□□ -1.72
CUP9P41817 MAP2YBL091C 1266 nt4.31□□□□□ -1.72
CUP9P41817 PPG1YNR032W 1107 nt4.31□□□□□ -1.72
CUP9P41817 MGS1YNL218W 1764 nt4.31□□□□□ -1.72
CUP9P41817 PSE1YMR308C 3270 nt4.31□□□□□ -1.72
CUP9P41817 RCK1YGL158W 1539 nt4.31□□□□□ -1.72
CUP9P41817 LPL1YOR059C 1353 nt4.3□□□□□ -1.72
CUP9P41817 FAP1YNL023C 2898 nt4.3□□□□□ -1.72
CUP9P41817 AIR2YDL175C 1035 nt4.3□□□□□ -1.72
CUP9P41817 TRX2YGR209C 315 nt4.3□□□□□ -1.72
CUP9P41817 YMR245WYMR245W 621 nt4.3□□□□□ -1.72
CUP9P41817 MET31YPL038W 534 nt4.3□□□□□ -1.72
CUP9P41817 ATG7YHR171W 1893 nt4.3□□□□□ -1.72
CUP9P41817 RSC6YCR052W 1452 nt4.3□□□□□ -1.72
CUP9P41817 HXT14YNL318C 1623 nt4.29□□□□□ -1.72
CUP9P41817 YER187WYER187W 426 nt4.29□□□□□ -1.72
CUP9P41817 TYW3YGL050W 822 nt4.29□□□□□ -1.72
CUP9P41817 RPL28YGL103W 450 nt4.29□□□□□ -1.72
CUP9P41817 YAR019W-AYAR019W-A 333 nt4.29□□□□□ -1.72
CUP9P41817 PEP4YPL154C 1218 nt4.29□□□□□ -1.72
CUP9P41817 TUP1YCR084C 2142 nt4.28□□□□□ -1.72
CUP9P41817 SIF2YBR103W 1608 nt4.28□□□□□ -1.72
CUP9P41817 BUD22YMR014W 1560 nt4.28□□□□□ -1.72
CUP9P41817 RRP3YHR065C 1506 nt4.28□□□□□ -1.72
CUP9P41817 MHF2YDL160C-A 243 nt4.28□□□□□ -1.72
CUP9P41817 SPR6YER115C 576 nt4.28□□□□□ -1.72
CUP9P41817 FAF1YIL019W 1041 nt4.28□□□□□ -1.72
CUP9P41817 TIF5YPR041W 1218 nt4.28□□□□□ -1.72
CUP9P41817 FUM1YPL262W 1467 nt4.28□□□□□ -1.72
CUP9P41817 ARN2YHL047C 1863 nt4.28□□□□□ -1.72
CUP9P41817 DRS1YLL008W 2259 nt4.28□□□□□ -1.72
CUP9P41817 APM2YHL019C 1818 nt4.28□□□□□ -1.72
CUP9P41817 RPN6YDL097C 1305 nt4.27□□□□□ -1.73
CUP9P41817 SEC39YLR440C 2130 nt4.27□□□□□ -1.73
CUP9P41817 SLC1YDL052C 912 nt4.27□□□□□ -1.73
CUP9P41817 AAD4YDL243C 990 nt4.27□□□□□ -1.73
CUP9P41817 COX18YGR062C 951 nt4.27□□□□□ -1.73
CUP9P41817 RMA1YKL132C 1293 nt4.27□□□□□ -1.73
CUP9P41817 YNL134CYNL134C 1131 nt4.27□□□□□ -1.73
CUP9P41817 SOL1YNR034W 966 nt4.27□□□□□ -1.73
CUP9P41817 STE7YDL159W 1548 nt4.26□□□□□ -1.73
CUP9P41817 YDR401WYDR401W 564 nt4.26□□□□□ -1.73
CUP9P41817 YML057C-AYML057C-A 390 nt4.26□□□□□ -1.73
CUP9P41817 YNL057WYNL057W 333 nt4.26□□□□□ -1.73
CUP9P41817 MVD1YNR043W 1191 nt4.26□□□□□ -1.73
CUP9P41817 RAD30YDR419W 1899 nt4.26□□□□□ -1.73
CUP9P41817 MAG2YLR427W 2013 nt4.26□□□□□ -1.73
CUP9P41817 ROT2YBR229C 2865 nt4.25□□□□□ -1.73
CUP9P41817 YEH2YLR020C 1617 nt4.25□□□□□ -1.73
CUP9P41817 ARO10YDR380W 1908 nt4.25□□□□□ -1.73
CUP9P41817 PXR1YGR280C 816 nt4.25□□□□□ -1.73
CUP9P41817 DOM34YNL001W 1161 nt4.25□□□□□ -1.73
CUP9P41817 TLG2YOL018C 1194 nt4.25□□□□□ -1.73
CUP9P41817 QCR2YPR191W 1107 nt4.25□□□□□ -1.73
CUP9P41817 ATG14YBR128C 1035 nt4.25□□□□□ -1.73
CUP9P41817 SED4YCR067C 3198 nt4.25□□□□□ -1.73
CUP9P41817 PAL1YDR348C 1500 nt4.25□□□□□ -1.73
CUP9P41817 STE20YHL007C 2820 nt4.25□□□□□ -1.73
Retrieved 100 of 7,029 protein–RNA pairs in 43.1 ms