Protein–RNA interactions for Protein: P25336

MSH3, DNA mismatch repair protein MSH3, yeastyeast

Predictions only

Length 1,018 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH3P25336 ATG16YMR159C 453 nt6.54□□□□□ -1.36
MSH3P25336 YMR295CYMR295C 594 nt6.54□□□□□ -1.36
MSH3P25336 YNL217WYNL217W 981 nt6.54□□□□□ -1.36
MSH3P25336 CAF40YNL288W 1122 nt6.54□□□□□ -1.36
MSH3P25336 FSF1YOR271C 984 nt6.54□□□□□ -1.36
MSH3P25336 MUP3YHL036W 1641 nt6.54□□□□□ -1.36
MSH3P25336 LUC7YDL087C 786 nt6.53□□□□□ -1.36
MSH3P25336 YFL012WYFL012W 447 nt6.53□□□□□ -1.36
MSH3P25336 YOR289WYOR289W 756 nt6.53□□□□□ -1.36
MSH3P25336 YPL191CYPL191C 1083 nt6.53□□□□□ -1.36
MSH3P25336 MCM3YEL032W 2916 nt6.53□□□□□ -1.36
MSH3P25336 HSE1YHL002W 1359 nt6.53□□□□□ -1.36
MSH3P25336 NHA1YLR138W 2958 nt6.53□□□□□ -1.36
MSH3P25336 VBA1YMR088C 1689 nt6.52□□□□□ -1.37
MSH3P25336 MAL13YGR288W 1422 nt6.52□□□□□ -1.37
MSH3P25336 DSF1YEL070W 1509 nt6.52□□□□□ -1.37
MSH3P25336 YNR073CYNR073C 1509 nt6.52□□□□□ -1.37
MSH3P25336 HST4YDR191W 1113 nt6.52□□□□□ -1.37
MSH3P25336 CAF16YFL028C 870 nt6.52□□□□□ -1.37
MSH3P25336 MED6YHR058C 888 nt6.52□□□□□ -1.37
MSH3P25336 YHR213W-AYHR213W-A 234 nt6.52□□□□□ -1.37
MSH3P25336 EBP2YKL172W 1284 nt6.52□□□□□ -1.37
MSH3P25336 ECM1YAL059W 639 nt6.52□□□□□ -1.37
MSH3P25336 RPS31YLR167W 459 nt6.52□□□□□ -1.37
MSH3P25336 YLR296WYLR296W 327 nt6.52□□□□□ -1.37
MSH3P25336 TAL1YLR354C 1008 nt6.52□□□□□ -1.37
MSH3P25336 PGA2YNL149C 390 nt6.52□□□□□ -1.37
MSH3P25336 RAD7YJR052W 1698 nt6.52□□□□□ -1.37
MSH3P25336 RAD24YER173W 1980 nt6.51□□□□□ -1.37
MSH3P25336 PTC1YDL006W 846 nt6.51□□□□□ -1.37
MSH3P25336 FYV1YDR024W 486 nt6.51□□□□□ -1.37
MSH3P25336 YEL075W-AYEL075W-A 612 nt6.51□□□□□ -1.37
MSH3P25336 DID4YKL002W 699 nt6.51□□□□□ -1.37
MSH3P25336 YJU3YKL094W 942 nt6.51□□□□□ -1.37
MSH3P25336 GMH1YKR030W 822 nt6.51□□□□□ -1.37
MSH3P25336 RPL10YLR075W 666 nt6.51□□□□□ -1.37
MSH3P25336 YLR463CYLR463C 552 nt6.51□□□□□ -1.37
MSH3P25336 YIF1YNL263C 945 nt6.51□□□□□ -1.37
MSH3P25336 CKB2YOR039W 777 nt6.51□□□□□ -1.37
MSH3P25336 IDI1YPL117C 867 nt6.51□□□□□ -1.37
MSH3P25336 ANT1YPR128C 987 nt6.51□□□□□ -1.37
MSH3P25336 PBP2YBR233W 1242 nt6.51□□□□□ -1.37
MSH3P25336 SHE9YDR393W 1371 nt6.51□□□□□ -1.37
MSH3P25336 SSK22YCR073C 3996 nt6.51□□□□□ -1.37
MSH3P25336 CLB1YGR108W 1416 nt6.5□□□□□ -1.37
MSH3P25336 YDL218WYDL218W 954 nt6.5□□□□□ -1.37
MSH3P25336 RME1YGR044C 903 nt6.5□□□□□ -1.37
MSH3P25336 PHB1YGR132C 864 nt6.5□□□□□ -1.37
MSH3P25336 YUH1YJR099W 711 nt6.5□□□□□ -1.37
MSH3P25336 DAN1YJR150C 897 nt6.5□□□□□ -1.37
MSH3P25336 IMD1YAR073W 1212 nt6.5□□□□□ -1.37
MSH3P25336 YLR326WYLR326W 723 nt6.5□□□□□ -1.37
MSH3P25336 HAP3YBL021C 435 nt6.5□□□□□ -1.37
MSH3P25336 URA5YML106W 681 nt6.5□□□□□ -1.37
MSH3P25336 YIM2YMR151W 438 nt6.5□□□□□ -1.37
MSH3P25336 SLZ1YNL196C 897 nt6.5□□□□□ -1.37
MSH3P25336 CSL4YNL232W 879 nt6.5□□□□□ -1.37
MSH3P25336 CPR8YNR028W 927 nt6.5□□□□□ -1.37
MSH3P25336 REX4YOL080C 870 nt6.5□□□□□ -1.37
MSH3P25336 CUS1YMR240C 1311 nt6.5□□□□□ -1.37
MSH3P25336 BNA5YLR231C 1362 nt6.49□□□□□ -1.37
MSH3P25336 PRS2YER099C 957 nt6.49□□□□□ -1.37
MSH3P25336 TOM40YMR203W 1164 nt6.49□□□□□ -1.37
MSH3P25336 NHP6BYBR089C-A 300 nt6.49□□□□□ -1.37
MSH3P25336 EMW1YNL313C 2715 nt6.49□□□□□ -1.37
MSH3P25336 RGT1YKL038W 3513 nt6.49□□□□□ -1.37
MSH3P25336 HAP2YGL237C 798 nt6.48□□□□□ -1.37
MSH3P25336 POL32YJR043C 1053 nt6.48□□□□□ -1.37
MSH3P25336 snR19snR19 568 nt6.48□□□□□ -1.37
MSH3P25336 COQ6YGR255C 1440 nt6.48□□□□□ -1.37
MSH3P25336 GIT1YCR098C 1557 nt6.48□□□□□ -1.37
MSH3P25336 PBI1YPL272C 1554 nt6.48□□□□□ -1.37
MSH3P25336 FRE7YOL152W 1863 nt6.47□□□□□ -1.37
MSH3P25336 YHR137C-AYHR137C-A 651 nt6.47□□□□□ -1.37
MSH3P25336 YIL089WYIL089W 618 nt6.47□□□□□ -1.37
MSH3P25336 RPS5YJR123W 678 nt6.47□□□□□ -1.37
MSH3P25336 YLR271WYLR271W 825 nt6.47□□□□□ -1.37
MSH3P25336 YNL042W-BYNL042W-B 258 nt6.47□□□□□ -1.37
MSH3P25336 RNH201YNL072W 924 nt6.47□□□□□ -1.37
MSH3P25336 TLG2YOL018C 1194 nt6.47□□□□□ -1.37
MSH3P25336 RPN7YPR108W 1290 nt6.47□□□□□ -1.37
MSH3P25336 YPK2YMR104C 2034 nt6.47□□□□□ -1.37
MSH3P25336 UBC6YER100W 753 nt6.46□□□□□ -1.38
MSH3P25336 YER134CYER134C 537 nt6.46□□□□□ -1.38
MSH3P25336 FMP48YGR052W 1110 nt6.46□□□□□ -1.38
MSH3P25336 LST7YGR057C 729 nt6.46□□□□□ -1.38
MSH3P25336 RIM101YHL027W 1878 nt6.46□□□□□ -1.38
MSH3P25336 ERC1YHR032W 1746 nt6.46□□□□□ -1.38
MSH3P25336 EST3YIL009C-A 546 nt6.46□□□□□ -1.38
MSH3P25336 YKL091CYKL091C 933 nt6.46□□□□□ -1.38
MSH3P25336 YLR202CYLR202C 327 nt6.46□□□□□ -1.38
MSH3P25336 QRI5YLR204W 336 nt6.46□□□□□ -1.38
MSH3P25336 GUA1YMR217W 1578 nt6.46□□□□□ -1.38
MSH3P25336 IPP1YBR011C 864 nt6.46□□□□□ -1.38
MSH3P25336 YOR342CYOR342C 960 nt6.46□□□□□ -1.38
MSH3P25336 YPL113CYPL113C 1191 nt6.46□□□□□ -1.38
MSH3P25336 APA1YCL050C 966 nt6.46□□□□□ -1.38
MSH3P25336 IMA2YOL157C 1770 nt6.46□□□□□ -1.38
MSH3P25336 YME1YPR024W 2244 nt6.45□□□□□ -1.38
MSH3P25336 HSP78YDR258C 2436 nt6.45□□□□□ -1.38
Retrieved 100 of 7,029 protein–RNA pairs in 15.3 ms