Protein–RNA interactions for Protein: O95685

PPP1R3D, Protein phosphatase 1 regulatory subunit 3D, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3DO95685 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
PPP1R3DO95685 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.73■□□□□ 0.91
PPP1R3DO95685 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3DO95685 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3DO95685 HSD17B1P1-201ENST00000590052 955 ntBASIC20.73■□□□□ 0.91
PPP1R3DO95685 U85056.1-201ENST00000616429 682 ntBASIC20.73■□□□□ 0.91
PPP1R3DO95685 NFE2L3P1-201ENST00000588207 1959 ntBASIC20.73■□□□□ 0.91
PPP1R3DO95685 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
PPP1R3DO95685 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
PPP1R3DO95685 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.72■□□□□ 0.91
PPP1R3DO95685 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3DO95685 ADSSL1-201ENST00000330877 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
PPP1R3DO95685 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PPP1R3DO95685 HIRA-202ENST00000340170 3395 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
PPP1R3DO95685 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.71■□□□□ 0.91
PPP1R3DO95685 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
PPP1R3DO95685 SMARCB1-201ENST00000263121 1690 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PPP1R3DO95685 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3DO95685 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC20.7■□□□□ 0.9
PPP1R3DO95685 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC20.7■□□□□ 0.9
PPP1R3DO95685 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC20.7■□□□□ 0.9
PPP1R3DO95685 AC104002.3-202ENST00000557170 1100 ntTSL 3 BASIC20.7■□□□□ 0.9
PPP1R3DO95685 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
PPP1R3DO95685 AC129492.7-201ENST00000622992 756 ntBASIC20.7■□□□□ 0.9
PPP1R3DO95685 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3DO95685 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3DO95685 C9orf163-202ENST00000624034 2573 ntBASIC20.7■□□□□ 0.9
PPP1R3DO95685 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PPP1R3DO95685 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3DO95685 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC20.69■□□□□ 0.9
PPP1R3DO95685 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3DO95685 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
PPP1R3DO95685 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC20.69■□□□□ 0.9
PPP1R3DO95685 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC20.69■□□□□ 0.9
PPP1R3DO95685 OSCAR-209ENST00000616215 2016 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
PPP1R3DO95685 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
PPP1R3DO95685 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PPP1R3DO95685 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
PPP1R3DO95685 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
PPP1R3DO95685 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.68■□□□□ 0.9
PPP1R3DO95685 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 TCEA1-213ENST00000640041 1171 ntTSL 5 BASIC20.68■□□□□ 0.9
PPP1R3DO95685 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC20.68■□□□□ 0.9
PPP1R3DO95685 AKT1-201ENST00000349310 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PPP1R3DO95685 STMN4-204ENST00000519997 1623 ntTSL 2 BASIC20.67■□□□□ 0.9
PPP1R3DO95685 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 PON2-202ENST00000433091 1726 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 RILP-201ENST00000301336 1771 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 LONRF2P2-201ENST00000439212 571 ntBASIC20.67■□□□□ 0.9
PPP1R3DO95685 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 PNLIPRP2-205ENST00000611850 1407 ntTSL 5 BASIC20.67■□□□□ 0.9
PPP1R3DO95685 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PPP1R3DO95685 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP1R3DO95685 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
PPP1R3DO95685 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PPP1R3DO95685 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3DO95685 KRT18P60-201ENST00000312876 1297 ntBASIC20.66■□□□□ 0.9
PPP1R3DO95685 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 C17orf49-201ENST00000439424 850 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3DO95685 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3DO95685 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3DO95685 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.66■□□□□ 0.9
PPP1R3DO95685 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PPP1R3DO95685 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC20.65■□□□□ 0.9
PPP1R3DO95685 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP1R3DO95685 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
PPP1R3DO95685 CD37-213ENST00000598095 1598 ntTSL 2 BASIC20.65■□□□□ 0.9
PPP1R3DO95685 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PPP1R3DO95685 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC20.65■□□□□ 0.9
PPP1R3DO95685 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PPP1R3DO95685 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PPP1R3DO95685 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PPP1R3DO95685 CCDC24-201ENST00000372318 1463 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 MYDGF-201ENST00000262947 1018 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP1R3DO95685 CAPNS1-207ENST00000589146 578 ntTSL 3 BASIC20.64■□□□□ 0.89
PPP1R3DO95685 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PPP1R3DO95685 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC20.64■□□□□ 0.89
PPP1R3DO95685 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 37 ms