Protein–RNA interactions for Protein: A6NKU9

SPDYE3, Speedy protein E3, humanhuman

Predictions only

Length 549 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPDYE3A6NKU9 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC26.29■■□□□ 1.8
SPDYE3A6NKU9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 C1QTNF12-201ENST00000330388 1036 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 CLTA-206ENST00000466396 695 ntTSL 2 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 MARCH2-201ENST00000215555 1376 ntAPPRIS P1 TSL 5 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 TMEM179-204ENST00000556573 1430 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 AC135731.1-201ENST00000569415 2548 ntBASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 CCDC92-209ENST00000545891 1790 ntAPPRIS P1 TSL 2 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC26.28■■□□□ 1.8
SPDYE3A6NKU9 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC26.27■■□□□ 1.8
SPDYE3A6NKU9 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC26.27■■□□□ 1.8
SPDYE3A6NKU9 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 UBXN2A-202ENST00000404924 1557 ntAPPRIS P1 TSL 2 BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 TFPT-201ENST00000391757 774 ntTSL 5 BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
SPDYE3A6NKU9 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE3A6NKU9 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE3A6NKU9 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
SPDYE3A6NKU9 CD37-213ENST00000598095 1598 ntTSL 2 BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 AL161729.1-201ENST00000604104 1402 ntBASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 MATK-202ENST00000395040 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 C6orf89-201ENST00000355190 1309 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 PRSS21-201ENST00000005995 1101 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 AL117332.1-201ENST00000622628 974 ntBASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 LRRC24-202ENST00000533758 1701 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 HSF4-225ENST00000584272 1549 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
SPDYE3A6NKU9 AL136090.1-201ENST00000446849 366 ntTSL 3 BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC26.23■■□□□ 1.79
SPDYE3A6NKU9 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 TMEM202-AS1-202ENST00000565181 2325 ntBASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 NKX6-3-201ENST00000518699 1352 ntAPPRIS P1 TSL 5 BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 AK3-203ENST00000447596 705 ntTSL 2 BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 EVX1-201ENST00000222761 1500 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 EED-207ENST00000528180 1745 ntTSL 5 BASIC26.22■■□□□ 1.79
SPDYE3A6NKU9 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 MIR3621-201ENST00000580529 85 ntBASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 AL356740.2-201ENST00000601559 647 ntBASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.21■■□□□ 1.79
SPDYE3A6NKU9 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
SPDYE3A6NKU9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 SRR-208ENST00000576848 588 ntTSL 4 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 CDH23-206ENST00000398842 1759 ntTSL 5 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 REST-206ENST00000612429 1376 ntTSL 5 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 REST-207ENST00000616975 1370 ntTSL 5 BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
SPDYE3A6NKU9 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 CHAC1-201ENST00000444189 1204 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 FAR2P4-203ENST00000560285 1739 ntTSL 2 BASIC26.19■■□□□ 1.78
SPDYE3A6NKU9 AC005703.6-201ENST00000623265 1329 ntBASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 DOK3-205ENST00000501403 1872 ntAPPRIS P1 TSL 5 BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 ADSSL1-202ENST00000332972 1969 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
SPDYE3A6NKU9 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC26.18■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms