Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
COL4A3BPQ9Y5P4 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.88■■□□□ 1.73
COL4A3BPQ9Y5P4 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
COL4A3BPQ9Y5P4 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.86■■□□□ 1.73
COL4A3BPQ9Y5P4 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL4A3BPQ9Y5P4 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC25.86■■□□□ 1.73
COL4A3BPQ9Y5P4 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
COL4A3BPQ9Y5P4 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 UNC93B8-201ENST00000511903 705 ntBASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 CPLX1-203ENST00000505203 2011 ntTSL 2 BASIC25.85■■□□□ 1.73
COL4A3BPQ9Y5P4 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 AF131216.4-201ENST00000638924 1588 ntBASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC25.84■■□□□ 1.73
COL4A3BPQ9Y5P4 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 AC092028.1-203ENST00000608262 953 ntBASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
COL4A3BPQ9Y5P4 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 DTWD2-204ENST00000515439 1275 ntTSL 5 BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 GRAMD4P7-201ENST00000578182 1232 ntBASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 AC131212.1-201ENST00000613771 668 ntBASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
COL4A3BPQ9Y5P4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 SENP5-202ENST00000419026 973 ntTSL 3 BASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 TSPY9P-201ENST00000440215 945 ntBASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 TSPY11P-201ENST00000442607 1045 ntBASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
COL4A3BPQ9Y5P4 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.8■■□□□ 1.72
COL4A3BPQ9Y5P4 HLA-L-211ENST00000482052 1765 ntBASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC25.79■■□□□ 1.72
COL4A3BPQ9Y5P4 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 LINC01124-201ENST00000409786 2117 ntBASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 TK2-202ENST00000417693 1046 ntTSL 2 BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 PTRH1-205ENST00000423807 1570 ntTSL 2 BASIC25.78■■□□□ 1.72
COL4A3BPQ9Y5P4 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 KRT16P3-201ENST00000439127 1283 ntBASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC25.77■■□□□ 1.72
COL4A3BPQ9Y5P4 TSEN54-201ENST00000333213 1944 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.72
COL4A3BPQ9Y5P4 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC25.76■■□□□ 1.71
COL4A3BPQ9Y5P4 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC25.76■■□□□ 1.71
COL4A3BPQ9Y5P4 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
COL4A3BPQ9Y5P4 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
COL4A3BPQ9Y5P4 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC25.74■■□□□ 1.71
Retrieved 100 of 98,524 protein–RNA pairs in 66.4 ms