Protein–RNA interactions for Protein: Q9BQ65

USB1, U6 snRNA phosphodiesterase, humanhuman

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USB1Q9BQ65 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
USB1Q9BQ65 AC131212.1-201ENST00000613771 668 ntBASIC20.44■□□□□ 0.86
USB1Q9BQ65 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
USB1Q9BQ65 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC20.44■□□□□ 0.86
USB1Q9BQ65 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
USB1Q9BQ65 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
USB1Q9BQ65 MYPOP-201ENST00000322217 1890 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USB1Q9BQ65 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USB1Q9BQ65 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.43■□□□□ 0.86
USB1Q9BQ65 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USB1Q9BQ65 GRAMD4P7-201ENST00000578182 1232 ntBASIC20.43■□□□□ 0.86
USB1Q9BQ65 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC20.43■□□□□ 0.86
USB1Q9BQ65 LINC00543-201ENST00000567234 1845 ntBASIC20.43■□□□□ 0.86
USB1Q9BQ65 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
USB1Q9BQ65 SLC16A11-202ENST00000447225 1779 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
USB1Q9BQ65 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC20.42■□□□□ 0.86
USB1Q9BQ65 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
USB1Q9BQ65 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 UNC93B8-201ENST00000511903 705 ntBASIC20.41■□□□□ 0.86
USB1Q9BQ65 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 LSM7-203ENST00000585409 512 ntTSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 ANKS3-204ENST00000585773 1946 ntTSL 2 BASIC20.41■□□□□ 0.86
USB1Q9BQ65 CTBP2-211ENST00000494626 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
USB1Q9BQ65 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
USB1Q9BQ65 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USB1Q9BQ65 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC20.4■□□□□ 0.86
USB1Q9BQ65 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USB1Q9BQ65 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
USB1Q9BQ65 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC20.4■□□□□ 0.86
USB1Q9BQ65 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
USB1Q9BQ65 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USB1Q9BQ65 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USB1Q9BQ65 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC20.39■□□□□ 0.86
USB1Q9BQ65 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USB1Q9BQ65 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
USB1Q9BQ65 RCCD1-203ENST00000555155 1871 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.86
USB1Q9BQ65 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
USB1Q9BQ65 TSPY9P-201ENST00000440215 945 ntBASIC20.39■□□□□ 0.85
USB1Q9BQ65 TSPY11P-201ENST00000442607 1045 ntBASIC20.39■□□□□ 0.85
USB1Q9BQ65 MTDHP2-201ENST00000601468 714 ntBASIC20.39■□□□□ 0.85
USB1Q9BQ65 AC010997.5-201ENST00000609182 354 ntBASIC20.39■□□□□ 0.85
USB1Q9BQ65 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC20.39■□□□□ 0.85
USB1Q9BQ65 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
USB1Q9BQ65 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
USB1Q9BQ65 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 CACNG6-203ENST00000352529 1635 ntTSL 5 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 AF131216.4-201ENST00000638924 1588 ntBASIC20.38■□□□□ 0.85
USB1Q9BQ65 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 MEIS2-204ENST00000397620 2295 ntTSL 2 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 MPP5-205ENST00000556345 1163 ntTSL 2 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
USB1Q9BQ65 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC20.38■□□□□ 0.85
USB1Q9BQ65 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USB1Q9BQ65 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC20.37■□□□□ 0.85
USB1Q9BQ65 MOSPD3-204ENST00000424091 1115 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USB1Q9BQ65 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 DUSP22-214ENST00000605315 867 ntTSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 EXOG-217ENST00000630638 197 ntTSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
USB1Q9BQ65 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
USB1Q9BQ65 SNHG7-204ENST00000447221 2157 ntTSL 2 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USB1Q9BQ65 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
USB1Q9BQ65 LBH-205ENST00000407930 756 ntTSL 2 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 MIR6724-1-201ENST00000616420 92 ntBASIC20.36■□□□□ 0.85
USB1Q9BQ65 MIR6724-2-201ENST00000616483 92 ntBASIC20.36■□□□□ 0.85
USB1Q9BQ65 MIR6724-4-201ENST00000617390 92 ntBASIC20.36■□□□□ 0.85
USB1Q9BQ65 MIR6724-3-201ENST00000622482 92 ntBASIC20.36■□□□□ 0.85
USB1Q9BQ65 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC20.36■□□□□ 0.85
USB1Q9BQ65 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
USB1Q9BQ65 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 87 ms