Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 REST-206ENST00000612429 1376 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRK2Q5S007 REST-207ENST00000616975 1370 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRK2Q5S007 ENKD1-206ENST00000602644 1353 ntTSL 5 BASIC20.45■□□□□ 0.86
LRRK2Q5S007 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
LRRK2Q5S007 AC093827.2-201ENST00000512654 315 ntBASIC20.45■□□□□ 0.86
LRRK2Q5S007 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 SLC39A3-203ENST00000545664 1219 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 TERF1P2-201ENST00000583350 1212 ntBASIC20.44■□□□□ 0.86
LRRK2Q5S007 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC20.44■□□□□ 0.86
LRRK2Q5S007 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.44■□□□□ 0.86
LRRK2Q5S007 C17orf82-201ENST00000623772 1530 ntBASIC20.43■□□□□ 0.86
LRRK2Q5S007 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.43■□□□□ 0.86
LRRK2Q5S007 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRK2Q5S007 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRK2Q5S007 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.43■□□□□ 0.86
LRRK2Q5S007 AC104771.1-201ENST00000603335 964 ntBASIC20.43■□□□□ 0.86
LRRK2Q5S007 RNF175-201ENST00000347063 1604 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRK2Q5S007 PITX1-205ENST00000506438 1305 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRK2Q5S007 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
LRRK2Q5S007 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC20.43■□□□□ 0.86
LRRK2Q5S007 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 COMT-204ENST00000403710 1548 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 AC092171.4-201ENST00000609130 632 ntBASIC20.42■□□□□ 0.86
LRRK2Q5S007 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
LRRK2Q5S007 ME3-201ENST00000323418 1068 ntTSL 5 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC20.42■□□□□ 0.86
LRRK2Q5S007 UTS2R-201ENST00000313135 1357 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
LRRK2Q5S007 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRK2Q5S007 GLRX3-201ENST00000331244 1302 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK2Q5S007 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK2Q5S007 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC20.41■□□□□ 0.86
LRRK2Q5S007 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.41■□□□□ 0.86
LRRK2Q5S007 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
LRRK2Q5S007 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.41■□□□□ 0.86
LRRK2Q5S007 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 C20orf27-202ENST00000379772 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.4■□□□□ 0.86
LRRK2Q5S007 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
LRRK2Q5S007 AC099791.2-201ENST00000605725 427 ntBASIC20.4■□□□□ 0.86
LRRK2Q5S007 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.39■□□□□ 0.86
LRRK2Q5S007 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC20.39■□□□□ 0.86
LRRK2Q5S007 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.39■□□□□ 0.85
LRRK2Q5S007 BX842568.3-201ENST00000418104 571 ntBASIC20.39■□□□□ 0.85
LRRK2Q5S007 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC20.39■□□□□ 0.85
LRRK2Q5S007 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC20.39■□□□□ 0.85
LRRK2Q5S007 TMEM191A-211ENST00000637163 1067 ntBASIC20.39■□□□□ 0.85
LRRK2Q5S007 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
LRRK2Q5S007 AC009102.2-201ENST00000606772 1639 ntBASIC20.39■□□□□ 0.85
LRRK2Q5S007 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.39■□□□□ 0.85
LRRK2Q5S007 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
LRRK2Q5S007 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK2Q5S007 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK2Q5S007 IL15RA-215ENST00000528354 1037 ntTSL 2 BASIC20.38■□□□□ 0.85
LRRK2Q5S007 IL15RA-220ENST00000620345 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK2Q5S007 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK2Q5S007 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
LRRK2Q5S007 AC090877.2-201ENST00000558441 1738 ntBASIC20.38■□□□□ 0.85
LRRK2Q5S007 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRK2Q5S007 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
LRRK2Q5S007 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC20.38■□□□□ 0.85
LRRK2Q5S007 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 CCDC92B-201ENST00000575506 885 ntBASIC20.37■□□□□ 0.85
LRRK2Q5S007 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.37■□□□□ 0.85
LRRK2Q5S007 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
LRRK2Q5S007 FOXO3B-201ENST00000395675 1928 ntBASIC20.36■□□□□ 0.85
LRRK2Q5S007 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
LRRK2Q5S007 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK2Q5S007 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC20.35■□□□□ 0.85
LRRK2Q5S007 NTF6G-201ENST00000591094 616 ntBASIC20.35■□□□□ 0.85
LRRK2Q5S007 LINC01003-201ENST00000564834 1764 ntBASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 139.2 ms