Protein–RNA interactions for Protein: Q53R12

TM4SF20, Transmembrane 4 L6 family member 20, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF20Q53R12 AC103834.1-201ENST00000520383 144 ntBASIC17.87■□□□□ 0.45
TM4SF20Q53R12 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
TM4SF20Q53R12 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.86■□□□□ 0.45
TM4SF20Q53R12 MIR4508-201ENST00000584178 70 ntBASIC17.86■□□□□ 0.45
TM4SF20Q53R12 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 MIR6089-201ENST00000616698 64 ntBASIC17.86■□□□□ 0.45
TM4SF20Q53R12 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC17.86■□□□□ 0.45
TM4SF20Q53R12 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 AC090877.2-201ENST00000558441 1738 ntBASIC17.85■□□□□ 0.45
TM4SF20Q53R12 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
TM4SF20Q53R12 RARA-202ENST00000394081 2285 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 PICALM-202ENST00000393346 2340 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
TM4SF20Q53R12 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF20Q53R12 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC17.83■□□□□ 0.45
TM4SF20Q53R12 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC17.83■□□□□ 0.45
TM4SF20Q53R12 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 EGR4-201ENST00000436467 2377 ntAPPRIS ALT2 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
TM4SF20Q53R12 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 AC120024.1-201ENST00000562672 995 ntBASIC17.82■□□□□ 0.44
TM4SF20Q53R12 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC17.82■□□□□ 0.44
TM4SF20Q53R12 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 BMP6-201ENST00000283147 2780 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 THA1P-201ENST00000590384 1145 ntBASIC17.81■□□□□ 0.44
TM4SF20Q53R12 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
TM4SF20Q53R12 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 RARRES2P1-201ENST00000474487 481 ntBASIC17.8■□□□□ 0.44
TM4SF20Q53R12 AC103724.3-201ENST00000564481 992 ntBASIC17.8■□□□□ 0.44
TM4SF20Q53R12 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
TM4SF20Q53R12 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 KRT18P24-201ENST00000344739 1156 ntBASIC17.79■□□□□ 0.44
TM4SF20Q53R12 AC011551.1-201ENST00000614101 683 ntBASIC17.79■□□□□ 0.44
TM4SF20Q53R12 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TM4SF20Q53R12 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 66.3 ms