Protein–RNA interactions for Protein: P34228

SEF1, Putative transcription factor SEF1, yeastyeast

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SEF1P34228 NHP6BYBR089C-A 300 nt5.16□□□□□ -1.58
SEF1P34228 CTF18YMR078C 2226 nt5.16□□□□□ -1.58
SEF1P34228 UBP7YIL156W 3216 nt5.16□□□□□ -1.58
SEF1P34228 SDA1YGR245C 2304 nt5.15□□□□□ -1.58
SEF1P34228 SIS2YKR072C 1689 nt5.15□□□□□ -1.58
SEF1P34228 GSH2YOL049W 1476 nt5.15□□□□□ -1.58
SEF1P34228 YTA12YMR089C 2478 nt5.15□□□□□ -1.58
SEF1P34228 RTN1YDR233C 888 nt5.15□□□□□ -1.59
SEF1P34228 RPS2YGL123W 765 nt5.15□□□□□ -1.59
SEF1P34228 YJL215CYJL215C 360 nt5.15□□□□□ -1.59
SEF1P34228 TAL1YLR354C 1008 nt5.15□□□□□ -1.59
SEF1P34228 YNL019CYNL019C 855 nt5.15□□□□□ -1.59
SEF1P34228 YNL033WYNL033W 855 nt5.15□□□□□ -1.59
SEF1P34228 SPS18YNL204C 903 nt5.15□□□□□ -1.59
SEF1P34228 YNR042WYNR042W 429 nt5.15□□□□□ -1.59
SEF1P34228 SSK22YCR073C 3996 nt5.15□□□□□ -1.59
SEF1P34228 YML082WYML082W 1950 nt5.15□□□□□ -1.59
SEF1P34228 DIA3YDL024C 1407 nt5.14□□□□□ -1.59
SEF1P34228 PWP1YLR196W 1731 nt5.14□□□□□ -1.59
SEF1P34228 YER148W-AYER148W-A 579 nt5.14□□□□□ -1.59
SEF1P34228 YER186CYER186C 921 nt5.14□□□□□ -1.59
SEF1P34228 YGL194C-AYGL194C-A 243 nt5.14□□□□□ -1.59
SEF1P34228 tR(ACG)JtR(ACG)J 73 nt5.14□□□□□ -1.59
SEF1P34228 APS3YJL024C 585 nt5.14□□□□□ -1.59
SEF1P34228 ECM1YAL059W 639 nt5.14□□□□□ -1.59
SEF1P34228 SPC34YKR037C 888 nt5.14□□□□□ -1.59
SEF1P34228 YMR086C-AYMR086C-A 339 nt5.14□□□□□ -1.59
SEF1P34228 PPA2YMR267W 933 nt5.14□□□□□ -1.59
SEF1P34228 DAL82YNL314W 768 nt5.14□□□□□ -1.59
SEF1P34228 CTR1YPR124W 1221 nt5.14□□□□□ -1.59
SEF1P34228 HSP78YDR258C 2436 nt5.14□□□□□ -1.59
SEF1P34228 HXT5YHR096C 1779 nt5.14□□□□□ -1.59
SEF1P34228 VTC2YFL004W 2487 nt5.13□□□□□ -1.59
SEF1P34228 ATO3YDR384C 828 nt5.13□□□□□ -1.59
SEF1P34228 BUR6YER159C 429 nt5.13□□□□□ -1.59
SEF1P34228 KSS1YGR040W 1107 nt5.13□□□□□ -1.59
SEF1P34228 PGU1YJR153W 1086 nt5.13□□□□□ -1.59
SEF1P34228 YLR118CYLR118C 684 nt5.13□□□□□ -1.59
SEF1P34228 CAM1YPL048W 1248 nt5.13□□□□□ -1.59
SEF1P34228 RRT2YBR246W 1164 nt5.13□□□□□ -1.59
SEF1P34228 ERC1YHR032W 1746 nt5.13□□□□□ -1.59
SEF1P34228 PSY4YBL046W 1326 nt5.13□□□□□ -1.59
SEF1P34228 DFG5YMR238W 1377 nt5.13□□□□□ -1.59
SEF1P34228 MPC54YOR177C 1395 nt5.13□□□□□ -1.59
SEF1P34228 MET3YJR010W 1536 nt5.13□□□□□ -1.59
SEF1P34228 YJR015WYJR015W 1533 nt5.13□□□□□ -1.59
SEF1P34228 ACS2YLR153C 2052 nt5.12□□□□□ -1.59
SEF1P34228 BUD14YAR014C 2130 nt5.12□□□□□ -1.59
SEF1P34228 VPS36YLR417W 1701 nt5.12□□□□□ -1.59
SEF1P34228 YGL262WYGL262W 528 nt5.12□□□□□ -1.59
SEF1P34228 YGR182CYGR182C 354 nt5.12□□□□□ -1.59
SEF1P34228 DBR1YKL149C 1218 nt5.12□□□□□ -1.59
SEF1P34228 PSR1YLL010C 1284 nt5.12□□□□□ -1.59
SEF1P34228 VTA1YLR181C 993 nt5.12□□□□□ -1.59
SEF1P34228 YLR402WYLR402W 192 nt5.12□□□□□ -1.59
SEF1P34228 YMR010WYMR010W 1218 nt5.12□□□□□ -1.59
SEF1P34228 VMA4YOR332W 702 nt5.12□□□□□ -1.59
SEF1P34228 MLC2YPR188C 492 nt5.12□□□□□ -1.59
SEF1P34228 YNL095CYNL095C 1929 nt5.12□□□□□ -1.59
SEF1P34228 UTP6YDR449C 1323 nt5.12□□□□□ -1.59
SEF1P34228 SAS4YDR181C 1446 nt5.12□□□□□ -1.59
SEF1P34228 DUR1,2YBR208C 5508 nt5.12□□□□□ -1.59
SEF1P34228 IXR1YKL032C 1794 nt5.11□□□□□ -1.59
SEF1P34228 MNN2YBR015C 1794 nt5.11□□□□□ -1.59
SEF1P34228 CBP1YJL209W 1965 nt5.11□□□□□ -1.59
SEF1P34228 SEC20YDR498C 1152 nt5.11□□□□□ -1.59
SEF1P34228 YKR104WYKR104W 921 nt5.11□□□□□ -1.59
SEF1P34228 YBR230W-AYBR230W-A 201 nt5.11□□□□□ -1.59
SEF1P34228 TIM54YJL054W 1437 nt5.11□□□□□ -1.59
SEF1P34228 MID1YNL291C 1647 nt5.11□□□□□ -1.59
SEF1P34228 SET4YJL105W 1683 nt5.11□□□□□ -1.59
SEF1P34228 RAD53YPL153C 2466 nt5.11□□□□□ -1.59
SEF1P34228 YGL036WYGL036W 2730 nt5.1□□□□□ -1.59
SEF1P34228 YER010CYER010C 705 nt5.1□□□□□ -1.59
SEF1P34228 TRP3YKL211C 1455 nt5.1□□□□□ -1.59
SEF1P34228 NOB1YOR056C 1380 nt5.1□□□□□ -1.59
SEF1P34228 SMP1YBR182C 1359 nt5.1□□□□□ -1.59
SEF1P34228 MCX1YBR227C 1563 nt5.1□□□□□ -1.59
SEF1P34228 HIR1YBL008W 2523 nt5.09□□□□□ -1.59
SEF1P34228 NFI1YOR156C 2181 nt5.09□□□□□ -1.59
SEF1P34228 RGT1YKL038W 3513 nt5.09□□□□□ -1.59
SEF1P34228 PHM8YER037W 966 nt5.09□□□□□ -1.59
SEF1P34228 YFR034W-AYFR034W-A 288 nt5.09□□□□□ -1.59
SEF1P34228 YIL028WYIL028W 399 nt5.09□□□□□ -1.59
SEF1P34228 YKL151CYKL151C 1014 nt5.09□□□□□ -1.59
SEF1P34228 SPC24YMR117C 642 nt5.09□□□□□ -1.59
SEF1P34228 DBF4YDR052C 2115 nt5.08□□□□□ -1.6
SEF1P34228 RTT106YNL206C 1368 nt5.08□□□□□ -1.6
SEF1P34228 snR57snR57 88 nt5.08□□□□□ -1.6
SEF1P34228 PCL9YDL179W 915 nt5.08□□□□□ -1.6
SEF1P34228 CAB4YGR277C 918 nt5.08□□□□□ -1.6
SEF1P34228 YKL169CYKL169C 384 nt5.08□□□□□ -1.6
SEF1P34228 POR1YNL055C 852 nt5.08□□□□□ -1.6
SEF1P34228 MFA2YNL145W 117 nt5.08□□□□□ -1.6
SEF1P34228 NRM1YNR009W 750 nt5.08□□□□□ -1.6
SEF1P34228 CSG2YBR036C 1233 nt5.08□□□□□ -1.6
SEF1P34228 PKC1YBL105C 3456 nt5.07□□□□□ -1.6
SEF1P34228 KCH1YJR054W 1494 nt5.07□□□□□ -1.6
SEF1P34228 SOG2YOR353C 2376 nt5.07□□□□□ -1.6
SEF1P34228 CYK3YDL117W 2658 nt5.07□□□□□ -1.6
Retrieved 100 of 7,029 protein–RNA pairs in 11.6 ms