Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 LINC02001-202ENST00000638682 1504 ntTSL 5 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 ARPP21-218ENST00000438071 1103 ntTSL 3 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 RAB28P2-201ENST00000454299 641 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AC093801.1-201ENST00000504017 307 ntTSL 2 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 RNU2-45P-201ENST00000516068 187 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AP003033.1-201ENST00000527244 415 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AC005730.2-201ENST00000564549 1184 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 LINC02259-202ENST00000565543 438 ntTSL 2 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AP005136.2-201ENST00000583253 1049 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AC091046.2-201ENST00000620775 665 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 AC026422.1-201ENST00000623961 452 ntBASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 IL1R1-201ENST00000409288 1735 ntTSL 5 BASIC14.1□□□□□ -0.15
KRTAP3-3Q9BYR6 MED6P1-201ENST00000439659 713 ntBASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 RPS3AP53-201ENST00000454716 778 ntBASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 ZNF720-211ENST00000539915 837 ntTSL 3 BASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 UBE2DNL-204ENST00000602536 740 ntBASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 AC016542.1-201ENST00000608259 493 ntBASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC14.09□□□□□ -0.15
KRTAP3-3Q9BYR6 RPL35A-206ENST00000464167 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
KRTAP3-3Q9BYR6 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 MTND4LP20-201ENST00000402379 270 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 MTND2P18-201ENST00000419962 1030 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 LIAS-204ENST00000424936 1011 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 VN1R21P-201ENST00000426703 765 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 MTND1P34-201ENST00000438556 671 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC096732.1-201ENST00000439565 477 ntTSL 3 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AL157385.1-201ENST00000446973 268 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AL357093.1-201ENST00000556926 458 ntTSL 2 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC01892-202ENST00000583985 540 ntTSL 4 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC008543.3-201ENST00000586983 491 ntTSL 5 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 RPL21P136-201ENST00000605378 396 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC128687.2-201ENST00000609657 566 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AL121904.1-201ENST00000611894 948 ntTSL 5 BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 AC098679.4-201ENST00000624241 654 ntBASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 LIMCH1-211ENST00000509638 1570 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
KRTAP3-3Q9BYR6 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 ARTN-202ENST00000372359 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 IL36G-201ENST00000259205 1195 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 UBE2D3-202ENST00000338145 896 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC01953-201ENST00000426870 717 ntTSL 5 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AC131097.1-201ENST00000437438 739 ntTSL 3 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AC092106.1-201ENST00000444291 373 ntBASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AC092164.1-203ENST00000444501 723 ntTSL 3 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 HULC-201ENST00000503668 556 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 RNU6-362P-201ENST00000516736 90 ntBASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 GPRC5D-AS1-203ENST00000536029 466 ntTSL 3 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AL110292.1-201ENST00000550024 477 ntTSL 3 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AP000350.5-201ENST00000609825 613 ntBASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AC002044.3-201ENST00000623314 541 ntBASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 MYCBP2-AS1-209ENST00000631152 412 ntTSL 5 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 OR2M2-203ENST00000641836 1151 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
KRTAP3-3Q9BYR6 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 AC011632.1-203ENST00000522914 454 ntTSL 3 BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 AC048382.1-201ENST00000542197 1018 ntTSL 5 BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 AC025811.1-201ENST00000604312 472 ntBASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 OR52B5P-203ENST00000641694 1313 ntBASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 FAM221A-201ENST00000344962 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
KRTAP3-3Q9BYR6 LFNG-201ENST00000222725 2377 ntAPPRIS P4 TSL 5 BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 ANKRD20A10P-201ENST00000457591 1515 ntBASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 B4GALT7-201ENST00000029410 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 TRIM60P13-201ENST00000432350 1283 ntBASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 AL591503.2-201ENST00000442314 1005 ntBASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 DNAJB3-202ENST00000449667 1266 ntBASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 AC022405.1-201ENST00000559841 516 ntTSL 3 BASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 AP003497.2-201ENST00000624220 967 ntBASIC14.05□□□□□ -0.16
KRTAP3-3Q9BYR6 INO80B-201ENST00000233331 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC073143.1-201ENST00000436316 395 ntBASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 MTCO3P28-201ENST00000513351 515 ntBASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC110760.1-201ENST00000513770 590 ntTSL 3 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC079917.1-202ENST00000534059 625 ntTSL 3 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC114947.2-202ENST00000569313 643 ntTSL 3 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 LINC00969-321ENST00000629990 806 ntTSL 5 BASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 AC010460.3-201ENST00000511359 1579 ntBASIC14.04□□□□□ -0.16
KRTAP3-3Q9BYR6 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
KRTAP3-3Q9BYR6 CMTM4-202ENST00000394106 1187 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 343.3 ms