Protein–RNA interactions for Protein: Q6MZP7

LIN54, Protein lin-54 homolog, humanhuman

Predictions only

Length 749 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54Q6MZP7 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 AC010907.1-201ENST00000441632 807 ntTSL 3 BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.79■□□□□ 0.76
LIN54Q6MZP7 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 PAIP1-208ENST00000514514 1603 ntTSL 5 BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
LIN54Q6MZP7 CIB2-202ENST00000539011 1511 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 CABP1-202ENST00000316803 1658 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
LIN54Q6MZP7 ST8SIA6-201ENST00000377602 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
LIN54Q6MZP7 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 AKT1S1-201ENST00000344175 1760 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 RDH14-201ENST00000381249 1587 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
LIN54Q6MZP7 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 C9orf163-202ENST00000624034 2573 ntBASIC19.75■□□□□ 0.75
LIN54Q6MZP7 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 DONSON-201ENST00000303071 2170 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 PEBP1-201ENST00000261313 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
LIN54Q6MZP7 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 AC126177.7-201ENST00000547904 679 ntBASIC19.74■□□□□ 0.75
LIN54Q6MZP7 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
LIN54Q6MZP7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 GNPTG-204ENST00000527137 386 ntTSL 2 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC19.73■□□□□ 0.75
LIN54Q6MZP7 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 SLC6A10P-202ENST00000431994 2058 ntBASIC19.72■□□□□ 0.75
LIN54Q6MZP7 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 MIR4449-201ENST00000578365 66 ntBASIC19.72■□□□□ 0.75
LIN54Q6MZP7 FLT1-209ENST00000639477 6337 ntTSL 5 BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
LIN54Q6MZP7 C12orf75-201ENST00000443585 1366 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
LIN54Q6MZP7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
LIN54Q6MZP7 AL359258.2-201ENST00000564063 1566 ntBASIC19.71■□□□□ 0.75
LIN54Q6MZP7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
LIN54Q6MZP7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC19.71■□□□□ 0.75
LIN54Q6MZP7 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
LIN54Q6MZP7 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30 ms