Protein–RNA interactions for Protein: Q04215

TY1A-MR1, Transposon Ty1-MR1 Gag polyprotein, yeastyeast

Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1A-MR1Q04215 LDB16YCL005W 771 nt6.75□□□□□ -1.33
TY1A-MR1Q04215 PAP1YKR002W 1707 nt6.75□□□□□ -1.33
TY1A-MR1Q04215 YBL113CYBL113C 2379 nt6.75□□□□□ -1.33
TY1A-MR1Q04215 BUD9YGR041W 1644 nt6.75□□□□□ -1.33
TY1A-MR1Q04215 MIX14YDR031W 366 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 YJL215CYJL215C 360 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 SIC1YLR079W 855 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 YLR257WYLR257W 966 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 YML053CYML053C 639 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 PGA2YNL149C 390 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 YOR199WYOR199W 330 nt6.74□□□□□ -1.33
TY1A-MR1Q04215 REF2YDR195W 1602 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 BUG1YDL099W 1026 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PFA5YDR459C 1125 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 RPP1YHR062C 882 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 CYC3YAL039C 810 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 HOT13YKL084W 351 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 GAT3YLR013W 426 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PRM9YAR031W 897 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PFA3YNL326C 1011 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 CDC21YOR074C 915 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PET123YOR158W 957 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PEP4YPL154C 1218 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 CTF3YLR381W 2202 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 SUP45YBR143C 1314 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 GSH2YOL049W 1476 nt6.73□□□□□ -1.33
TY1A-MR1Q04215 PRB1YEL060C 1908 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 UME1YPL139C 1383 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 STB3YDR169C 1542 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 ERO1YML130C 1692 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)DtA(AGC)D 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)FtA(AGC)F 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)GtA(AGC)G 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)HtA(AGC)H 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)JtA(AGC)J 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)K1tA(AGC)K1 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)K2tA(AGC)K2 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)LtA(AGC)L 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)M1tA(AGC)M1 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)M2tA(AGC)M2 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 tA(AGC)PtA(AGC)P 73 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YDR215CYDR215C 414 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YDR282CYDR282C 1245 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YER156CYER156C 1017 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 CAK1YFL029C 1107 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 RSM27YGR215W 333 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 VMA16YHR026W 642 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 CAB2YIL083C 1098 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 PRS1YKL181W 1284 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YNL120CYNL120C 486 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YOL013W-BYOL013W-B 291 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 ATG14YBR128C 1035 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 MRPS9YBR146W 837 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 ERT1YBR239C 1590 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YHL012WYHL012W 1482 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 YCK1YHR135C 1617 nt6.72□□□□□ -1.33
TY1A-MR1Q04215 DCR2YLR361C 1737 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 RAD55YDR076W 1221 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 PAU5YFL020C 369 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 YHR069C-AYHR069C-A 363 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 TTI2YJR136C 1266 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 SWD2YKL018W 990 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 NIT3YLR351C 876 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 RAD10YML095C 633 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 YMR166CYMR166C 1107 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 ATO2YNR002C 849 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 YOL035CYOL035C 303 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 YPL205CYPL205C 345 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 YBR287WYBR287W 1284 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 SEC24YIL109C 2781 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 GUT1YHL032C 2130 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 TOS4YLR183C 1470 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 DEG1YFL001W 1329 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 RDS2YPL133C 1341 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 PTR2YKR093W 1806 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 AFG2YLR397C 2343 nt6.71□□□□□ -1.34
TY1A-MR1Q04215 CDC23YHR166C 1881 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 CDC16YKL022C 2523 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 GTS1YGL181W 1191 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 SPC34YKR037C 888 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 VPS65YLR322W 315 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 MID2YLR332W 1131 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 YLR363W-AYLR363W-A 258 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 SUR7YML052W 909 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 YMR030W-AYMR030W-A 291 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 YNL017CYNL017C 339 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 SWM2YNR004W 441 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 PSH1YOL054W 1221 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 DIM1YPL266W 957 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 YPR172WYPR172W 603 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 PST1YDR055W 1335 nt6.7□□□□□ -1.34
TY1A-MR1Q04215 TOD6YBL054W 1578 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 VAB2YEL005C 849 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 RML2YEL050C 1182 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 GLE2YER107C 1098 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 MED6YHR058C 888 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 YJL043WYJL043W 774 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 AAD14YNL331C 1131 nt6.69□□□□□ -1.34
TY1A-MR1Q04215 CST9YLR394W 1449 nt6.68□□□□□ -1.34
TY1A-MR1Q04215 TIM50YPL063W 1431 nt6.68□□□□□ -1.34
Retrieved 100 of 7,029 protein–RNA pairs in 20 ms