Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 AC010980.1-201ENST00000587192 1142 ntBASIC22.52■■□□□ 1.2
SLC6A12P48065 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC6A12P48065 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC22.52■■□□□ 1.2
SLC6A12P48065 AC004812.2-201ENST00000611079 2094 ntBASIC22.52■■□□□ 1.2
SLC6A12P48065 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A12P48065 THRA-202ENST00000394121 2260 ntTSL 2 BASIC22.52■■□□□ 1.2
SLC6A12P48065 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A12P48065 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC22.52■■□□□ 1.2
SLC6A12P48065 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC6A12P48065 AC009511.2-201ENST00000545904 679 ntTSL 2 BASIC22.51■■□□□ 1.19
SLC6A12P48065 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC22.51■■□□□ 1.19
SLC6A12P48065 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC22.51■■□□□ 1.19
SLC6A12P48065 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC22.51■■□□□ 1.19
SLC6A12P48065 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC22.5■■□□□ 1.19
SLC6A12P48065 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A12P48065 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC22.5■■□□□ 1.19
SLC6A12P48065 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
SLC6A12P48065 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC22.5■■□□□ 1.19
SLC6A12P48065 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC22.49■■□□□ 1.19
SLC6A12P48065 HAGHL-205ENST00000561546 1041 ntTSL 2 BASIC22.49■■□□□ 1.19
SLC6A12P48065 CLPTM1-201ENST00000337392 2604 ntAPPRIS P1 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC6A12P48065 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC22.49■■□□□ 1.19
SLC6A12P48065 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A12P48065 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC22.48■■□□□ 1.19
SLC6A12P48065 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC22.48■■□□□ 1.19
SLC6A12P48065 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC22.48■■□□□ 1.19
SLC6A12P48065 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
SLC6A12P48065 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC22.48■■□□□ 1.19
SLC6A12P48065 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A12P48065 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 CDIPT-207ENST00000566113 1671 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A12P48065 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 SHD-204ENST00000599689 1729 ntTSL 5 BASIC22.47■■□□□ 1.19
SLC6A12P48065 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC22.47■■□□□ 1.19
SLC6A12P48065 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC22.47■■□□□ 1.19
SLC6A12P48065 ARL6IP4-210ENST00000453766 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC22.47■■□□□ 1.19
SLC6A12P48065 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC22.47■■□□□ 1.19
SLC6A12P48065 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
SLC6A12P48065 C14orf80-204ENST00000392522 1630 ntAPPRIS P4 TSL 5 BASIC22.46■■□□□ 1.19
SLC6A12P48065 POLR2H-208ENST00000456318 1802 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SLC6A12P48065 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC22.46■■□□□ 1.19
SLC6A12P48065 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC22.46■■□□□ 1.19
SLC6A12P48065 CD63-202ENST00000420846 981 ntAPPRIS P1 TSL 5 BASIC22.46■■□□□ 1.19
SLC6A12P48065 BTBD2-201ENST00000255608 2649 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A12P48065 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC22.46■■□□□ 1.19
SLC6A12P48065 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC22.46■■□□□ 1.19
SLC6A12P48065 SERINC5-203ENST00000509193 1441 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A12P48065 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
SLC6A12P48065 ARMC10-204ENST00000425331 2443 ntTSL 2 BASIC22.46■■□□□ 1.19
SLC6A12P48065 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC22.45■■□□□ 1.19
SLC6A12P48065 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC22.45■■□□□ 1.18
SLC6A12P48065 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC22.45■■□□□ 1.18
SLC6A12P48065 AC120024.1-201ENST00000562672 995 ntBASIC22.45■■□□□ 1.18
SLC6A12P48065 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A12P48065 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
SLC6A12P48065 BTBD6-201ENST00000327471 1948 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
SLC6A12P48065 RARA-204ENST00000394089 2024 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SLC6A12P48065 ARFIP2-202ENST00000396777 1868 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
SLC6A12P48065 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A12P48065 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
SLC6A12P48065 GAK-223ENST00000628912 497 ntTSL 5 BASIC22.44■■□□□ 1.18
SLC6A12P48065 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC22.44■■□□□ 1.18
SLC6A12P48065 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 NKX2-3-201ENST00000344586 2097 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
SLC6A12P48065 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
SLC6A12P48065 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
SLC6A12P48065 MIR4508-201ENST00000584178 70 ntBASIC22.43■■□□□ 1.18
SLC6A12P48065 D2HGDH-203ENST00000403782 2208 ntTSL 2 BASIC22.43■■□□□ 1.18
SLC6A12P48065 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC22.43■■□□□ 1.18
SLC6A12P48065 MRPL10-202ENST00000351111 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
SLC6A12P48065 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A12P48065 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A12P48065 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A12P48065 KRT18P24-201ENST00000344739 1156 ntBASIC22.42■■□□□ 1.18
SLC6A12P48065 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
SLC6A12P48065 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
SLC6A12P48065 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC22.42■■□□□ 1.18
SLC6A12P48065 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A12P48065 TRIM72-202ENST00000613872 1573 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
SLC6A12P48065 HSD11B1L-206ENST00000423665 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A12P48065 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A12P48065 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC22.41■■□□□ 1.18
SLC6A12P48065 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A12P48065 QDPR-202ENST00000428702 1278 ntTSL 2 BASIC22.41■■□□□ 1.18
SLC6A12P48065 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
SLC6A12P48065 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms