Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC23.76■■□□□ 1.39
MT-CO1P00395 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-CO1P00395 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.76■■□□□ 1.39
MT-CO1P00395 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC23.76■■□□□ 1.39
MT-CO1P00395 ZNF180-205ENST00000587047 525 ntTSL 4 BASIC23.76■■□□□ 1.39
MT-CO1P00395 AC090241.2-201ENST00000602329 432 ntTSL 4 BASIC23.76■■□□□ 1.39
MT-CO1P00395 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-CO1P00395 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
MT-CO1P00395 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
MT-CO1P00395 NFKBIE-201ENST00000275015 2581 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
MT-CO1P00395 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-CO1P00395 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-CO1P00395 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC23.75■■□□□ 1.39
MT-CO1P00395 SYCE1-204ENST00000432597 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
MT-CO1P00395 TMEM151B-201ENST00000438774 1140 ntAPPRIS ALT2 TSL 3 BASIC23.75■■□□□ 1.39
MT-CO1P00395 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC23.75■■□□□ 1.39
MT-CO1P00395 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-CO1P00395 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
MT-CO1P00395 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC23.74■■□□□ 1.39
MT-CO1P00395 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 SENP5-202ENST00000419026 973 ntTSL 3 BASIC23.74■■□□□ 1.39
MT-CO1P00395 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
MT-CO1P00395 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-CO1P00395 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC23.73■■□□□ 1.39
MT-CO1P00395 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
MT-CO1P00395 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC23.73■■□□□ 1.39
MT-CO1P00395 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC23.73■■□□□ 1.39
MT-CO1P00395 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC23.72■■□□□ 1.39
MT-CO1P00395 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
MT-CO1P00395 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC23.72■■□□□ 1.39
MT-CO1P00395 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC23.72■■□□□ 1.39
MT-CO1P00395 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 UNC93B8-201ENST00000511903 705 ntBASIC23.72■■□□□ 1.39
MT-CO1P00395 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.72■■□□□ 1.39
MT-CO1P00395 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
MT-CO1P00395 AC022211.4-201ENST00000625094 2161 ntBASIC23.71■■□□□ 1.39
MT-CO1P00395 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC23.71■■□□□ 1.39
MT-CO1P00395 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-CO1P00395 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-CO1P00395 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC23.71■■□□□ 1.39
MT-CO1P00395 AC092028.1-203ENST00000608262 953 ntBASIC23.71■■□□□ 1.39
MT-CO1P00395 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
MT-CO1P00395 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC23.71■■□□□ 1.39
MT-CO1P00395 LSR-205ENST00000427250 1606 ntTSL 2 BASIC23.7■■□□□ 1.39
MT-CO1P00395 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MT-CO1P00395 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.7■■□□□ 1.38
MT-CO1P00395 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-CO1P00395 AL356441.2-201ENST00000443009 864 ntBASIC23.7■■□□□ 1.38
MT-CO1P00395 MIR6089-201ENST00000616698 64 ntBASIC23.7■■□□□ 1.38
MT-CO1P00395 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
MT-CO1P00395 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC23.7■■□□□ 1.38
MT-CO1P00395 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-CO1P00395 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC23.69■■□□□ 1.38
MT-CO1P00395 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC23.69■■□□□ 1.38
MT-CO1P00395 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC23.69■■□□□ 1.38
MT-CO1P00395 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC23.69■■□□□ 1.38
MT-CO1P00395 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC23.69■■□□□ 1.38
MT-CO1P00395 TK2-202ENST00000417693 1046 ntTSL 2 BASIC23.69■■□□□ 1.38
MT-CO1P00395 TSPY9P-201ENST00000440215 945 ntBASIC23.69■■□□□ 1.38
MT-CO1P00395 TSPY11P-201ENST00000442607 1045 ntBASIC23.69■■□□□ 1.38
MT-CO1P00395 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-CO1P00395 PTOV1-220ENST00000601675 1587 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
MT-CO1P00395 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-CO1P00395 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC23.68■■□□□ 1.38
MT-CO1P00395 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-CO1P00395 ZC3H14-202ENST00000302216 2560 ntTSL 1 (best) BASIC23.68■■□□□ 1.38
MT-CO1P00395 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
MT-CO1P00395 SNCB-201ENST00000310112 1383 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-CO1P00395 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-CO1P00395 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-CO1P00395 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC23.67■■□□□ 1.38
MT-CO1P00395 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC23.67■■□□□ 1.38
MT-CO1P00395 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC23.67■■□□□ 1.38
MT-CO1P00395 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC23.67■■□□□ 1.38
MT-CO1P00395 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MT-CO1P00395 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC23.66■■□□□ 1.38
MT-CO1P00395 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-CO1P00395 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-CO1P00395 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-CO1P00395 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC23.66■■□□□ 1.38
MT-CO1P00395 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC23.66■■□□□ 1.38
MT-CO1P00395 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC23.66■■□□□ 1.38
MT-CO1P00395 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC23.66■■□□□ 1.38
MT-CO1P00395 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC23.66■■□□□ 1.38
MT-CO1P00395 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC23.66■■□□□ 1.38
MT-CO1P00395 WFDC1-201ENST00000219454 1534 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO1P00395 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO1P00395 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC23.65■■□□□ 1.38
MT-CO1P00395 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO1P00395 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC23.65■■□□□ 1.38
MT-CO1P00395 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC23.64■■□□□ 1.38
MT-CO1P00395 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC23.64■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms