Protein–RNA interactions for Protein: O14545

TRAFD1, TRAF-type zinc finger domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 582 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1O14545 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TRAFD1O14545 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC23.78■■□□□ 1.4
TRAFD1O14545 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAFD1O14545 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC23.78■■□□□ 1.4
TRAFD1O14545 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
TRAFD1O14545 AC022211.4-201ENST00000625094 2161 ntBASIC23.78■■□□□ 1.4
TRAFD1O14545 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
TRAFD1O14545 ARMC6-201ENST00000269932 2412 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
TRAFD1O14545 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAFD1O14545 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRAFD1O14545 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAFD1O14545 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
TRAFD1O14545 ROR1-202ENST00000371080 2305 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAFD1O14545 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
TRAFD1O14545 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC23.76■■□□□ 1.39
TRAFD1O14545 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAFD1O14545 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRAFD1O14545 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
TRAFD1O14545 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC23.76■■□□□ 1.39
TRAFD1O14545 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC23.76■■□□□ 1.39
TRAFD1O14545 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRAFD1O14545 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC23.75■■□□□ 1.39
TRAFD1O14545 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRAFD1O14545 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRAFD1O14545 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.75■■□□□ 1.39
TRAFD1O14545 RABEP2-203ENST00000544477 1645 ntTSL 2 BASIC23.75■■□□□ 1.39
TRAFD1O14545 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
TRAFD1O14545 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC23.75■■□□□ 1.39
TRAFD1O14545 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC23.75■■□□□ 1.39
TRAFD1O14545 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAFD1O14545 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAFD1O14545 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAFD1O14545 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAFD1O14545 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC23.74■■□□□ 1.39
TRAFD1O14545 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
TRAFD1O14545 KRT18P24-201ENST00000344739 1156 ntBASIC23.73■■□□□ 1.39
TRAFD1O14545 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC23.73■■□□□ 1.39
TRAFD1O14545 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
TRAFD1O14545 LINC00543-201ENST00000567234 1845 ntBASIC23.73■■□□□ 1.39
TRAFD1O14545 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
TRAFD1O14545 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAFD1O14545 NUDT18-202ENST00000613958 1754 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAFD1O14545 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC23.72■■□□□ 1.39
TRAFD1O14545 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAFD1O14545 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
TRAFD1O14545 PPP1R26-201ENST00000356818 4932 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
TRAFD1O14545 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC23.71■■□□□ 1.39
TRAFD1O14545 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC23.71■■□□□ 1.39
TRAFD1O14545 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC23.71■■□□□ 1.39
TRAFD1O14545 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.71■■□□□ 1.39
TRAFD1O14545 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
TRAFD1O14545 AC068473.5-201ENST00000616428 2072 ntBASIC23.71■■□□□ 1.39
TRAFD1O14545 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.39
TRAFD1O14545 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC23.7■■□□□ 1.39
TRAFD1O14545 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
TRAFD1O14545 AC120024.1-201ENST00000562672 995 ntBASIC23.7■■□□□ 1.38
TRAFD1O14545 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.7■■□□□ 1.38
TRAFD1O14545 AL451085.2-201ENST00000605085 799 ntBASIC23.7■■□□□ 1.38
TRAFD1O14545 AL031848.2-201ENST00000607670 837 ntBASIC23.7■■□□□ 1.38
TRAFD1O14545 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC23.7■■□□□ 1.38
TRAFD1O14545 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 ZNF837-201ENST00000427624 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 RBMXL2-201ENST00000306904 1874 ntAPPRIS P1 BASIC23.69■■□□□ 1.38
TRAFD1O14545 RCC2-201ENST00000375433 2030 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
TRAFD1O14545 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC23.69■■□□□ 1.38
TRAFD1O14545 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.69■■□□□ 1.38
TRAFD1O14545 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC23.68■■□□□ 1.38
TRAFD1O14545 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAFD1O14545 DLK2-201ENST00000357338 2038 ntAPPRIS P3 TSL 2 BASIC23.68■■□□□ 1.38
TRAFD1O14545 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.68■■□□□ 1.38
TRAFD1O14545 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC23.67■■□□□ 1.38
TRAFD1O14545 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRAFD1O14545 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAFD1O14545 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAFD1O14545 AC011551.1-201ENST00000614101 683 ntBASIC23.67■■□□□ 1.38
TRAFD1O14545 PDE10A-205ENST00000616273 2118 ntTSL 2 BASIC23.67■■□□□ 1.38
TRAFD1O14545 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC23.67■■□□□ 1.38
TRAFD1O14545 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.67■■□□□ 1.38
TRAFD1O14545 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC23.66■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms