Protein–RNA interactions for Protein: A0A096LPE2

SAA2-SAA4, SAA2-SAA4 readthrough, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SAA2-SAA4A0A096LPE2 AC004812.2-201ENST00000611079 2094 ntBASIC18.96■□□□□ 0.63
SAA2-SAA4A0A096LPE2 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA2-SAA4A0A096LPE2 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA2-SAA4A0A096LPE2 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
SAA2-SAA4A0A096LPE2 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.96■□□□□ 0.63
SAA2-SAA4A0A096LPE2 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AC139795.1-202ENST00000500444 432 ntBASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SSSCA1-AS1-201ENST00000567594 614 ntBASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 NR2F6-201ENST00000291442 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SLC9A3-203ENST00000514375 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AMZ2P1-201ENST00000397713 2259 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MAP2K2-201ENST00000262948 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.94■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FAHD1-203ENST00000427358 1974 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SNF8-202ENST00000502492 2319 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CKB-201ENST00000348956 1709 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 GALR2-201ENST00000329003 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ZNF444-211ENST00000592949 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MDK-206ENST00000407067 1026 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 P3H3-201ENST00000290510 2632 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC18.92■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 LINC02043-201ENST00000419745 1832 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CARNMT1-201ENST00000376830 1012 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AC004987.1-201ENST00000428627 508 ntBASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ATP5G2P3-201ENST00000429083 425 ntBASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ADPRHL2-201ENST00000373178 1668 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ABCB10P4-201ENST00000566803 2184 ntBASIC18.91■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FAM83F-202ENST00000473717 1917 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 COPRS-201ENST00000302362 968 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 SHD-204ENST00000599689 1729 ntTSL 5 BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
SAA2-SAA4A0A096LPE2 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC18.89■□□□□ 0.62
SAA2-SAA4A0A096LPE2 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 RAB4B-203ENST00000594800 1173 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC019171.1-201ENST00000601251 1056 ntBASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.89■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ZNF205-201ENST00000219091 1947 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 BHLHE23-202ENST00000612929 1109 ntBASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 KLF16-204ENST00000617223 1133 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
SAA2-SAA4A0A096LPE2 ABHD17C-201ENST00000258884 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 OSCAR-205ENST00000359649 1892 ntAPPRIS P4 TSL 2 BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC18.87■□□□□ 0.61
SAA2-SAA4A0A096LPE2 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms