Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB13Q9Y5F0 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB13Q9Y5F0 CLEC2L-201ENST00000422142 1359 ntAPPRIS P2 TSL 3 BASIC25.77■■□□□ 1.72
PCDHB13Q9Y5F0 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB13Q9Y5F0 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC25.77■■□□□ 1.72
PCDHB13Q9Y5F0 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC25.76■■□□□ 1.72
PCDHB13Q9Y5F0 RIMKLB-205ENST00000535829 2236 ntAPPRIS P1 TSL 2 BASIC25.76■■□□□ 1.71
PCDHB13Q9Y5F0 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC25.76■■□□□ 1.71
PCDHB13Q9Y5F0 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC25.76■■□□□ 1.71
PCDHB13Q9Y5F0 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 AC103834.1-201ENST00000520383 144 ntBASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 ZNF606-203ENST00000547121 1196 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 AC011551.1-201ENST00000614101 683 ntBASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 TMEM185A-208ENST00000611119 2662 ntTSL 2 BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC25.75■■□□□ 1.71
PCDHB13Q9Y5F0 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
PCDHB13Q9Y5F0 YBX1P4-201ENST00000392794 808 ntBASIC25.74■■□□□ 1.71
PCDHB13Q9Y5F0 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 AC093390.2-201ENST00000638628 1007 ntTSL 5 BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC25.73■■□□□ 1.71
PCDHB13Q9Y5F0 KRT8P33-201ENST00000508125 1423 ntBASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 KRT18P24-201ENST00000344739 1156 ntBASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 AC010913.1-201ENST00000608612 420 ntTSL 2 BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 TSPAN10-204ENST00000611590 1068 ntAPPRIS ALT2 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
PCDHB13Q9Y5F0 EED-207ENST00000528180 1745 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 TMPO-AS1-201ENST00000546421 738 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 MMP25-AS1-209ENST00000576250 779 ntTSL 5 BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC25.71■■□□□ 1.71
PCDHB13Q9Y5F0 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 AC120024.1-201ENST00000562672 995 ntBASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
PCDHB13Q9Y5F0 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
PCDHB13Q9Y5F0 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 PLEKHA8-201ENST00000258679 2293 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
PCDHB13Q9Y5F0 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB13Q9Y5F0 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB13Q9Y5F0 FAM120C-203ENST00000477084 1140 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB13Q9Y5F0 THA1P-201ENST00000590384 1145 ntBASIC25.67■■□□□ 1.7
PCDHB13Q9Y5F0 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
PCDHB13Q9Y5F0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 AL139125.2-201ENST00000623134 1869 ntBASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 IGFBP6-201ENST00000301464 1169 ntAPPRIS P2 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 GAK-223ENST00000628912 497 ntTSL 5 BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
PCDHB13Q9Y5F0 KLHDC9-203ENST00000392192 1333 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 AC064853.4-201ENST00000641394 363 ntAPPRIS P1 BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 MATK-204ENST00000585778 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 GADD45A-202ENST00000370986 1496 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 LRRC14B-201ENST00000328278 1573 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC25.65■■□□□ 1.7
PCDHB13Q9Y5F0 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 AC009531.1-201ENST00000442323 580 ntTSL 4 BASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 AC103724.3-201ENST00000564481 992 ntBASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 AL121906.1-201ENST00000606866 440 ntTSL 3 BASIC25.64■■□□□ 1.7
PCDHB13Q9Y5F0 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC25.64■■□□□ 1.69
PCDHB13Q9Y5F0 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB13Q9Y5F0 KLC3-201ENST00000391946 1780 ntAPPRIS P2 TSL 1 (best) BASIC25.64■■□□□ 1.69
PCDHB13Q9Y5F0 HLA-L-211ENST00000482052 1765 ntBASIC25.64■■□□□ 1.69
PCDHB13Q9Y5F0 ZNRF1-201ENST00000320619 2479 ntTSL 1 (best) BASIC25.63■■□□□ 1.69
Retrieved 100 of 98,524 protein–RNA pairs in 54.6 ms