Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 PIM3-201ENST00000360612 2369 ntAPPRIS P1 TSL 1 (best) BASIC30.19■■■□□ 2.42
ZNF428Q96B54 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC30.18■■■□□ 2.42
ZNF428Q96B54 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC30.18■■■□□ 2.42
ZNF428Q96B54 TK2-216ENST00000564917 1156 ntTSL 3 BASIC30.18■■■□□ 2.42
ZNF428Q96B54 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF428Q96B54 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC30.17■■■□□ 2.42
ZNF428Q96B54 ZNF302-211ENST00000509528 577 ntTSL 4 BASIC30.17■■■□□ 2.42
ZNF428Q96B54 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF428Q96B54 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF428Q96B54 IL17RE-203ENST00000421412 2158 ntAPPRIS ALT2 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF428Q96B54 TMUB1-203ENST00000462940 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.17■■■□□ 2.42
ZNF428Q96B54 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF428Q96B54 RBM33-201ENST00000287912 1404 ntTSL 2 BASIC30.16■■■□□ 2.42
ZNF428Q96B54 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF428Q96B54 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC30.16■■■□□ 2.42
ZNF428Q96B54 AC011551.1-201ENST00000614101 683 ntBASIC30.16■■■□□ 2.42
ZNF428Q96B54 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF428Q96B54 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
ZNF428Q96B54 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZNF428Q96B54 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
ZNF428Q96B54 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC30.15■■■□□ 2.42
ZNF428Q96B54 MTURN-203ENST00000409688 843 ntTSL 2 BASIC30.15■■■□□ 2.42
ZNF428Q96B54 AC090877.2-201ENST00000558441 1738 ntBASIC30.15■■■□□ 2.42
ZNF428Q96B54 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC30.15■■■□□ 2.42
ZNF428Q96B54 R3HCC1-202ENST00000411463 1467 ntAPPRIS P5 TSL 5 BASIC30.14■■■□□ 2.42
ZNF428Q96B54 CAMK2N2-201ENST00000296238 1362 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
ZNF428Q96B54 NRG1-210ENST00000520407 1955 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
ZNF428Q96B54 FAM162B-201ENST00000368557 1036 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ZNF428Q96B54 EED-207ENST00000528180 1745 ntTSL 5 BASIC30.13■■■□□ 2.41
ZNF428Q96B54 NAGS-201ENST00000293404 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
ZNF428Q96B54 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC30.12■■■□□ 2.41
ZNF428Q96B54 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC30.12■■■□□ 2.41
ZNF428Q96B54 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC30.12■■■□□ 2.41
ZNF428Q96B54 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC30.12■■■□□ 2.41
ZNF428Q96B54 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZNF428Q96B54 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
ZNF428Q96B54 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF428Q96B54 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF428Q96B54 NAXE-202ENST00000368234 901 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF428Q96B54 AL356441.2-201ENST00000443009 864 ntBASIC30.11■■■□□ 2.41
ZNF428Q96B54 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF428Q96B54 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
ZNF428Q96B54 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC30.11■■■□□ 2.41
ZNF428Q96B54 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF428Q96B54 RFNG-201ENST00000310496 1828 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
ZNF428Q96B54 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF428Q96B54 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC30.1■■■□□ 2.41
ZNF428Q96B54 ST20-MTHFS-201ENST00000479961 859 ntAPPRIS P1 TSL 3 BASIC30.1■■■□□ 2.41
ZNF428Q96B54 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC30.1■■■□□ 2.41
ZNF428Q96B54 AC120024.1-201ENST00000562672 995 ntBASIC30.1■■■□□ 2.41
ZNF428Q96B54 GATA4-207ENST00000532059 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF428Q96B54 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
ZNF428Q96B54 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF428Q96B54 CREM-229ENST00000474362 1030 ntTSL 2 BASIC30.09■■■□□ 2.41
ZNF428Q96B54 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF428Q96B54 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF428Q96B54 ZEB1-AS1-205ENST00000605946 382 ntTSL 5 BASIC30.09■■■□□ 2.41
ZNF428Q96B54 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC30.09■■■□□ 2.41
ZNF428Q96B54 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC30.09■■■□□ 2.41
ZNF428Q96B54 CDC16-204ENST00000360383 2211 ntAPPRIS P3 TSL 5 BASIC30.08■■■□□ 2.41
ZNF428Q96B54 NKAIN3-202ENST00000523211 1988 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
ZNF428Q96B54 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
ZNF428Q96B54 TNIP2-206ENST00000510267 2006 ntAPPRIS ALT2 TSL 2 BASIC30.08■■■□□ 2.41
ZNF428Q96B54 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF428Q96B54 KRT18P24-201ENST00000344739 1156 ntBASIC30.07■■■□□ 2.4
ZNF428Q96B54 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF428Q96B54 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC30.07■■■□□ 2.4
ZNF428Q96B54 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF428Q96B54 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
ZNF428Q96B54 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF428Q96B54 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC30.06■■■□□ 2.4
ZNF428Q96B54 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF428Q96B54 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF428Q96B54 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC30.06■■■□□ 2.4
ZNF428Q96B54 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF428Q96B54 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC30.06■■■□□ 2.4
ZNF428Q96B54 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ZNF428Q96B54 AC105219.1-201ENST00000531565 1963 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ZNF428Q96B54 ARHGEF7-206ENST00000375741 5525 ntTSL 1 (best) BASIC30.05■■■□□ 2.4
ZNF428Q96B54 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC30.04■■■□□ 2.4
ZNF428Q96B54 NR6A1-201ENST00000344523 1846 ntAPPRIS ALT2 TSL 5 BASIC30.04■■■□□ 2.4
ZNF428Q96B54 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
ZNF428Q96B54 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC30.04■■■□□ 2.4
ZNF428Q96B54 SLC52A2-202ENST00000402965 1777 ntAPPRIS P1 TSL 2 BASIC30.04■■■□□ 2.4
ZNF428Q96B54 CIRBP-216ENST00000588090 1459 ntAPPRIS P3 TSL 3 BASIC30.04■■■□□ 2.4
ZNF428Q96B54 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC30.04■■■□□ 2.4
ZNF428Q96B54 CCDC151-202ENST00000586836 1867 ntTSL 2 BASIC30.03■■■□□ 2.4
ZNF428Q96B54 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC30.03■■■□□ 2.4
ZNF428Q96B54 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ZNF428Q96B54 SLIT1-203ENST00000371041 1695 ntTSL 2 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZNF428Q96B54 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
ZNF428Q96B54 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 VSTM2L-201ENST00000373459 831 ntTSL 3 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 SNAI3-AS1-203ENST00000565633 829 ntTSL 5 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC30.02■■■□□ 2.4
ZNF428Q96B54 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC30.02■■■□□ 2.4
ZNF428Q96B54 MIR4787-201ENST00000607364 84 ntBASIC30.02■■■□□ 2.4
ZNF428Q96B54 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC30.02■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms