Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
DDX39AO00148 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX39AO00148 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
DDX39AO00148 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX39AO00148 AF131216.4-201ENST00000638924 1588 ntBASIC26.33■■□□□ 1.81
DDX39AO00148 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX39AO00148 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC26.33■■□□□ 1.81
DDX39AO00148 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC26.33■■□□□ 1.81
DDX39AO00148 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC26.33■■□□□ 1.81
DDX39AO00148 AL356441.2-201ENST00000443009 864 ntBASIC26.33■■□□□ 1.81
DDX39AO00148 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC26.33■■□□□ 1.81
DDX39AO00148 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
DDX39AO00148 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.8
DDX39AO00148 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX39AO00148 HADH-203ENST00000505878 1719 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 UNC93B8-201ENST00000511903 705 ntBASIC26.32■■□□□ 1.8
DDX39AO00148 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC26.32■■□□□ 1.8
DDX39AO00148 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC26.32■■□□□ 1.8
DDX39AO00148 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 ELOC-206ENST00000520242 1573 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 LTB4R2-205ENST00000543919 1560 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
DDX39AO00148 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC26.32■■□□□ 1.8
DDX39AO00148 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC26.32■■□□□ 1.8
DDX39AO00148 SEPT2-205ENST00000401990 1734 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX39AO00148 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC26.31■■□□□ 1.8
DDX39AO00148 MROH6-202ENST00000524906 1794 ntAPPRIS ALT2 TSL 3 BASIC26.31■■□□□ 1.8
DDX39AO00148 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
DDX39AO00148 HABP4-202ENST00000375251 2304 ntTSL 1 (best) BASIC26.31■■□□□ 1.8
DDX39AO00148 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX39AO00148 TMEM185A-207ENST00000600449 2840 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX39AO00148 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX39AO00148 EZH2-206ENST00000478654 2522 ntTSL 5 BASIC26.3■■□□□ 1.8
DDX39AO00148 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC26.3■■□□□ 1.8
DDX39AO00148 SENP5-202ENST00000419026 973 ntTSL 3 BASIC26.3■■□□□ 1.8
DDX39AO00148 CTDSP2-203ENST00000547701 988 ntTSL 1 (best) BASIC26.3■■□□□ 1.8
DDX39AO00148 GRAMD4P7-201ENST00000578182 1232 ntBASIC26.3■■□□□ 1.8
DDX39AO00148 AC131212.1-201ENST00000613771 668 ntBASIC26.3■■□□□ 1.8
DDX39AO00148 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.3■■□□□ 1.8
DDX39AO00148 MEIOB-203ENST00000412554 1884 ntAPPRIS P1 TSL 5 BASIC26.3■■□□□ 1.8
DDX39AO00148 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
DDX39AO00148 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX39AO00148 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX39AO00148 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX39AO00148 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX39AO00148 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX39AO00148 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC26.29■■□□□ 1.8
DDX39AO00148 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.29■■□□□ 1.8
DDX39AO00148 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX39AO00148 TRIM54-201ENST00000296098 2027 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
DDX39AO00148 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX39AO00148 C14orf80-211ENST00000450383 1107 ntAPPRIS ALT2 TSL 5 BASIC26.28■■□□□ 1.8
DDX39AO00148 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC26.28■■□□□ 1.8
DDX39AO00148 AC092028.1-203ENST00000608262 953 ntBASIC26.28■■□□□ 1.8
DDX39AO00148 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC26.28■■□□□ 1.8
DDX39AO00148 CRACR2B-202ENST00000525077 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
DDX39AO00148 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX39AO00148 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
DDX39AO00148 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
DDX39AO00148 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.27■■□□□ 1.8
DDX39AO00148 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX39AO00148 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.26■■□□□ 1.79
DDX39AO00148 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC26.26■■□□□ 1.79
DDX39AO00148 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC26.26■■□□□ 1.79
DDX39AO00148 CHTF8-205ENST00000519520 856 ntTSL 2 BASIC26.26■■□□□ 1.79
DDX39AO00148 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
DDX39AO00148 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX39AO00148 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC26.26■■□□□ 1.79
DDX39AO00148 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
DDX39AO00148 S100A6-201ENST00000368719 665 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
DDX39AO00148 TK2-202ENST00000417693 1046 ntTSL 2 BASIC26.25■■□□□ 1.79
DDX39AO00148 KRT16P3-201ENST00000439127 1283 ntBASIC26.25■■□□□ 1.79
DDX39AO00148 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC26.25■■□□□ 1.79
DDX39AO00148 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC26.25■■□□□ 1.79
DDX39AO00148 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
DDX39AO00148 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX39AO00148 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC26.24■■□□□ 1.79
DDX39AO00148 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX39AO00148 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX39AO00148 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
DDX39AO00148 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
DDX39AO00148 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC26.23■■□□□ 1.79
DDX39AO00148 GUCD1-202ENST00000402766 865 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX39AO00148 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC26.23■■□□□ 1.79
DDX39AO00148 CCDC194-202ENST00000636079 705 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
DDX39AO00148 SHF-207ENST00000560540 2062 ntTSL 5 BASIC26.23■■□□□ 1.79
DDX39AO00148 BIN1-206ENST00000352848 2209 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
DDX39AO00148 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX39AO00148 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC26.22■■□□□ 1.79
DDX39AO00148 IGFBP3-201ENST00000275521 2262 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
DDX39AO00148 DLK2-202ENST00000372485 1572 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
DDX39AO00148 SNX5-201ENST00000377759 2270 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX39AO00148 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX39AO00148 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX39AO00148 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC26.21■■□□□ 1.79
DDX39AO00148 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
DDX39AO00148 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms