Protein–RNA interactions for Protein: Q9C040

TRIM2, Tripartite motif-containing protein 2, humanhuman

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2Q9C040 PPP4C-201ENST00000279387 1407 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 AC018755.3-202ENST00000596210 929 ntBASIC21.5■■□□□ 1.03
TRIM2Q9C040 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM2Q9C040 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC21.5■■□□□ 1.03
TRIM2Q9C040 YWHAH-201ENST00000248975 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
TRIM2Q9C040 ADIPOR1-201ENST00000340990 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 PKM-204ENST00000449901 2526 ntTSL 2 BASIC21.5■■□□□ 1.03
TRIM2Q9C040 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
TRIM2Q9C040 FOXO3B-201ENST00000395675 1928 ntBASIC21.49■■□□□ 1.03
TRIM2Q9C040 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 LINC01124-201ENST00000409786 2117 ntBASIC21.49■■□□□ 1.03
TRIM2Q9C040 LSR-205ENST00000427250 1606 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM2Q9C040 AL592293.1-201ENST00000502889 1188 ntBASIC21.49■■□□□ 1.03
TRIM2Q9C040 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM2Q9C040 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 SH2D3A-202ENST00000437152 2013 ntTSL 2 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC21.49■■□□□ 1.03
TRIM2Q9C040 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
TRIM2Q9C040 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC21.48■■□□□ 1.03
TRIM2Q9C040 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
TRIM2Q9C040 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIM2Q9C040 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
TRIM2Q9C040 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 LYPD6B-204ENST00000409876 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 SMOX-202ENST00000305958 2233 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
TRIM2Q9C040 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC21.48■■□□□ 1.03
TRIM2Q9C040 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM2Q9C040 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM2Q9C040 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM2Q9C040 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC21.47■■□□□ 1.03
TRIM2Q9C040 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM2Q9C040 AUTS2-203ENST00000406775 5950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
TRIM2Q9C040 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC21.47■■□□□ 1.03
TRIM2Q9C040 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC21.46■■□□□ 1.03
TRIM2Q9C040 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM2Q9C040 AZIN2-201ENST00000294517 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM2Q9C040 KRT18P60-201ENST00000312876 1297 ntBASIC21.46■■□□□ 1.03
TRIM2Q9C040 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
TRIM2Q9C040 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC21.46■■□□□ 1.03
TRIM2Q9C040 LDHB-203ENST00000396076 1538 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
TRIM2Q9C040 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
TRIM2Q9C040 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC21.45■■□□□ 1.02
TRIM2Q9C040 AC141586.4-201ENST00000624558 1573 ntBASIC21.45■■□□□ 1.02
TRIM2Q9C040 RPS2P7-201ENST00000447334 885 ntBASIC21.45■■□□□ 1.02
TRIM2Q9C040 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC21.45■■□□□ 1.02
TRIM2Q9C040 MAF-202ENST00000393350 6384 ntAPPRIS ALT2 BASIC21.45■■□□□ 1.02
TRIM2Q9C040 NPTXR-201ENST00000333039 5784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM2Q9C040 LINC00543-201ENST00000567234 1845 ntBASIC21.44■■□□□ 1.02
TRIM2Q9C040 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
TRIM2Q9C040 MEIS3-201ENST00000331559 2104 ntAPPRIS ALT2 TSL 5 BASIC21.44■■□□□ 1.02
TRIM2Q9C040 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
TRIM2Q9C040 SLBP-206ENST00000489418 1977 ntAPPRIS P2 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM2Q9C040 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM2Q9C040 AL033527.3-201ENST00000566366 1196 ntBASIC21.43■■□□□ 1.02
TRIM2Q9C040 MYBL1-204ENST00000522677 5192 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM2Q9C040 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC21.43■■□□□ 1.02
TRIM2Q9C040 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM2Q9C040 CCND3-223ENST00000616010 2047 ntTSL 5 BASIC21.43■■□□□ 1.02
TRIM2Q9C040 ZNF767P-202ENST00000472212 2100 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
TRIM2Q9C040 GATS-205ENST00000436886 2726 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 AP2M1-202ENST00000382456 2091 ntAPPRIS ALT1 TSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 ANO8-204ENST00000630631 1905 ntTSL 5 BASIC21.42■■□□□ 1.02
TRIM2Q9C040 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
TRIM2Q9C040 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM2Q9C040 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM2Q9C040 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM2Q9C040 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM2Q9C040 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC21.41■■□□□ 1.02
TRIM2Q9C040 SPCS2P3-201ENST00000500401 656 ntBASIC21.41■■□□□ 1.02
TRIM2Q9C040 MIR6765-201ENST00000614092 87 ntBASIC21.41■■□□□ 1.02
TRIM2Q9C040 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
TRIM2Q9C040 BDH1-207ENST00000441275 1605 ntTSL 5 BASIC21.4■■□□□ 1.02
TRIM2Q9C040 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC21.4■■□□□ 1.02
TRIM2Q9C040 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 IDNK-203ENST00000405990 629 ntTSL 2 BASIC21.4■■□□□ 1.02
TRIM2Q9C040 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC21.4■■□□□ 1.02
TRIM2Q9C040 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC21.4■■□□□ 1.02
TRIM2Q9C040 RARA-AS1-201ENST00000581080 1790 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
TRIM2Q9C040 TSPY13P-201ENST00000338964 914 ntBASIC21.39■■□□□ 1.01
TRIM2Q9C040 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC21.39■■□□□ 1.01
TRIM2Q9C040 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC21.39■■□□□ 1.01
TRIM2Q9C040 ATG16L2-205ENST00000534905 1614 ntTSL 1 (best) BASIC21.39■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms