Protein–RNA interactions for Protein: P43569

CAF16, CCR4-associated factor 16, yeast

Predictions only

Length 289 aa.

Protein		RNA				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	UniProt Accession	Gene	Ensembl Transcript ID	Length	Transcript Status	Prediction Score	Prediction z-Score	Detected Interaction
CAF16	P43569	PCS60	YBR222C	1632 nt		5.81	□□□□□ -1.48
CAF16	P43569	RRI1	YDL216C	1323 nt		5.81	□□□□□ -1.48
CAF16	P43569	YAL016C-A	YAL016C-A	315 nt		5.81	□□□□□ -1.48
CAF16	P43569	ELF1	YKL160W	438 nt		5.81	□□□□□ -1.48
CAF16	P43569	HYM1	YKL189W	1200 nt		5.81	□□□□□ -1.48
CAF16	P43569	ADE1	YAR015W	921 nt		5.81	□□□□□ -1.48
CAF16	P43569	EMG1	YLR186W	759 nt		5.81	□□□□□ -1.48
CAF16	P43569	YLR374C	YLR374C	390 nt		5.81	□□□□□ -1.48
CAF16	P43569	RUF21	RUF21	707 nt		5.81	□□□□□ -1.48
CAF16	P43569	YBR056C-B	YBR056C-B	159 nt		5.81	□□□□□ -1.48
CAF16	P43569	XBP1	YIL101C	1944 nt		5.81	□□□□□ -1.48
CAF16	P43569	DUG1	YFR044C	1446 nt		5.81	□□□□□ -1.48
CAF16	P43569	VNX1	YNL321W	2727 nt		5.81	□□□□□ -1.48
CAF16	P43569	MET7	YOR241W	1647 nt		5.81	□□□□□ -1.48
CAF16	P43569	LDB19	YOR322C	2457 nt		5.81	□□□□□ -1.48
CAF16	P43569	YPK2	YMR104C	2034 nt		5.81	□□□□□ -1.48
CAF16	P43569	MTC5	YDR128W	3447 nt		5.8	□□□□□ -1.48
CAF16	P43569	AI3	Q0060	1248 nt		5.8	□□□□□ -1.48
CAF16	P43569	PHO92	YDR374C	921 nt		5.8	□□□□□ -1.48
CAF16	P43569	DMC1	YER179W	1005 nt		5.8	□□□□□ -1.48
CAF16	P43569	HAC1	YFL031W	717 nt		5.8	□□□□□ -1.48
CAF16	P43569	CIA2	YHR122W	696 nt		5.8	□□□□□ -1.48
CAF16	P43569	YIL152W	YIL152W	708 nt		5.8	□□□□□ -1.48
CAF16	P43569	CLN2	YPL256C	1638 nt		5.8	□□□□□ -1.48
CAF16	P43569	YDL158C	YDL158C	309 nt		5.79	□□□□□ -1.48
CAF16	P43569	CLC1	YGR167W	702 nt		5.79	□□□□□ -1.48
CAF16	P43569	SPC3	YLR066W	555 nt		5.79	□□□□□ -1.48
CAF16	P43569	YML083C	YML083C	1257 nt		5.79	□□□□□ -1.48
CAF16	P43569	GLC8	YMR311C	690 nt		5.79	□□□□□ -1.48
CAF16	P43569	snR3	snR3	194 nt		5.79	□□□□□ -1.48
CAF16	P43569	MTC1	YJL123C	1437 nt		5.79	□□□□□ -1.48
CAF16	P43569	SPC97	YHR172W	2472 nt		5.79	□□□□□ -1.48
CAF16	P43569	RBA50	YDR527W	1320 nt		5.78	□□□□□ -1.48
CAF16	P43569	MDM10	YAL010C	1482 nt		5.78	□□□□□ -1.48
CAF16	P43569	LSG1	YGL099W	1923 nt		5.78	□□□□□ -1.48
CAF16	P43569	SHR3	YDL212W	633 nt		5.78	□□□□□ -1.48
CAF16	P43569	NSI1	YDR026C	1713 nt		5.78	□□□□□ -1.48
CAF16	P43569	YDR124W	YDR124W	975 nt		5.78	□□□□□ -1.48
CAF16	P43569	GPI11	YDR302W	660 nt		5.78	□□□□□ -1.48
CAF16	P43569	YDR415C	YDR415C	1125 nt		5.78	□□□□□ -1.48
CAF16	P43569	YGL258W-A	YGL258W-A	234 nt		5.78	□□□□□ -1.48
CAF16	P43569	TED1	YIL039W	1422 nt		5.78	□□□□□ -1.48
CAF16	P43569	YIL067C	YIL067C	2037 nt		5.78	□□□□□ -1.48
CAF16	P43569	NCA3	YJL116C	1014 nt		5.78	□□□□□ -1.48
CAF16	P43569	PTM1	YKL039W	1572 nt		5.78	□□□□□ -1.48
CAF16	P43569	YBL077W	YBL077W	432 nt		5.78	□□□□□ -1.48
CAF16	P43569	SSU72	YNL222W	621 nt		5.78	□□□□□ -1.48
CAF16	P43569	MPD1	YOR288C	957 nt		5.78	□□□□□ -1.48
CAF16	P43569	PRP19	YLL036C	1512 nt		5.78	□□□□□ -1.48
CAF16	P43569	HEM1	YDR232W	1647 nt		5.77	□□□□□ -1.48
CAF16	P43569	YDR098C-A	YDR098C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YDR210C-C	YDR210C-C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YDR261C-C	YDR261C-C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YDR316W-A	YDR316W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YDR365W-A	YDR365W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YER137C-A	YER137C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YER159C-A	YER159C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YGR027W-A	YGR027W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YGR038C-A	YGR038C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YGR161C-C	YGR161C-C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YJR026W	YJR026W	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YJR028W	YJR028W	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YAR010C	YAR010C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YLR157C-A	YLR157C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YLR227W-A	YLR227W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YLR256W-A	YLR256W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YML040W	YML040W	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YML045W-A	YML045W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YMR051C	YMR051C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YNL054W-A	YNL054W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YOL103W-A	YOL103W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YPL257W-A	YPL257W-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YPR137C-A	YPR137C-A	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	YPR158C-C	YPR158C-C	1323 nt		5.77	□□□□□ -1.49
CAF16	P43569	QNS1	YHR074W	2145 nt		5.77	□□□□□ -1.49
CAF16	P43569	CLA4	YNL298W	2529 nt		5.77	□□□□□ -1.49
CAF16	P43569	CBP1	YJL209W	1965 nt		5.77	□□□□□ -1.49
CAF16	P43569	RRG1	YDR065W	1098 nt		5.77	□□□□□ -1.49
CAF16	P43569	RRP17	YDR412W	708 nt		5.77	□□□□□ -1.49
CAF16	P43569	YFL041W-A	YFL041W-A	192 nt		5.77	□□□□□ -1.49
CAF16	P43569	KSS1	YGR040W	1107 nt		5.77	□□□□□ -1.49
CAF16	P43569	PIL1	YGR086C	1020 nt		5.77	□□□□□ -1.49
CAF16	P43569	PAU17	YLL025W	375 nt		5.77	□□□□□ -1.49
CAF16	P43569	ATP23	YNR020C	813 nt		5.77	□□□□□ -1.49
CAF16	P43569	DPM1	YPR183W	804 nt		5.77	□□□□□ -1.49
CAF16	P43569	LDB16	YCL005W	771 nt		5.77	□□□□□ -1.49
CAF16	P43569	SKN1	YGR143W	2316 nt		5.77	□□□□□ -1.49
CAF16	P43569	RIT1	YMR283C	1542 nt		5.77	□□□□□ -1.49
CAF16	P43569	RAD57	YDR004W	1383 nt		5.77	□□□□□ -1.49
CAF16	P43569	HRB1	YNL004W	1365 nt		5.77	□□□□□ -1.49
CAF16	P43569	YEL020C	YEL020C	1683 nt		5.76	□□□□□ -1.49
CAF16	P43569	YIL077C	YIL077C	963 nt		5.76	□□□□□ -1.49
CAF16	P43569	LCB3	YJL134W	1230 nt		5.76	□□□□□ -1.49
CAF16	P43569	DID4	YKL002W	699 nt		5.76	□□□□□ -1.49
CAF16	P43569	YKL071W	YKL071W	771 nt		5.76	□□□□□ -1.49
CAF16	P43569	BTS1	YPL069C	1008 nt		5.76	□□□□□ -1.49
CAF16	P43569	GCR2	YNL199C	1605 nt		5.76	□□□□□ -1.49
CAF16	P43569	IFM1	YOL023W	2031 nt		5.75	□□□□□ -1.49
CAF16	P43569	SUB2	YDL084W	1341 nt		5.75	□□□□□ -1.49
CAF16	P43569	TIP20	YGL145W	2106 nt		5.75	□□□□□ -1.49

Retrieved 100 of 7,029 protein–RNA pairs in 20.5 ms