Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 TNS2-209ENST00000549498 1368 ntTSL 217.76■□□□□ 0.433e-7■■■■■ 33.4
U2AF2P26368 ACAD8-206ENST00000524739 1032 ntTSL 311.26□□□□□ -0.613e-7■■■■■ 33.4
U2AF2P26368 ACAD8-211ENST00000527713 467 ntTSL 57.97□□□□□ -1.133e-7■■■■■ 33.4
U2AF2P26368 SHMT1-205ENST00000395684 2652 ntTSL 1 (best)14.9□□□□□ -0.026e-9■■■■■ 33.4
U2AF2P26368 IKBKB-227ENST00000523105 1966 ntTSL 214.47□□□□□ -0.098e-7■■■■■ 33.4
U2AF2P26368 IKBKB-204ENST00000517502 498 ntTSL 311.46□□□□□ -0.578e-7■■■■■ 33.4
U2AF2P26368 ANGEL1-205ENST00000557179 1427 ntTSL 2 BASIC14.66□□□□□ -0.061e-6■■■■■ 33.3
U2AF2P26368 ANGEL1-201ENST00000251089 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.181e-6■■■■■ 33.3
U2AF2P26368 ANGEL1-203ENST00000555079 553 ntTSL 59.61□□□□□ -0.871e-6■■■■■ 33.3
U2AF2P26368 CUL4A-205ENST00000463426 893 ntTSL 329.73■■■□□ 2.352e-7■■■■■ 33.3
U2AF2P26368 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC25.69■■□□□ 1.72e-7■■■■■ 33.3
U2AF2P26368 AL157392.3-224ENST00000620849 765 ntTSL 519.75■□□□□ 0.754e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-219ENST00000614991 985 ntTSL 518.55■□□□□ 0.564e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-220ENST00000600501 793 ntTSL 517.39■□□□□ 0.374e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-225ENST00000612515 813 ntTSL 517.2■□□□□ 0.344e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-222ENST00000613332 738 ntTSL 516.49■□□□□ 0.234e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-223ENST00000621308 793 ntTSL 515.71■□□□□ 0.114e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-218ENST00000600249 773 ntTSL 5 BASIC12.59□□□□□ -0.394e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-221ENST00000596235 790 ntTSL 511.06□□□□□ -0.644e-11■■■■■ 33.3
U2AF2P26368 AL157392.3-217ENST00000613937 923 ntTSL 58.53□□□□□ -1.044e-11■■■■■ 33.3
U2AF2P26368 GOSR1-210ENST00000537788 582 ntTSL 35.03□□□□□ -1.65e-7■■■■■ 33.2
U2AF2P26368 GOSR1-206ENST00000467635 584 ntTSL 23.06□□□□□ -1.925e-7■■■■■ 33.2
U2AF2P26368 SLC20A1-208ENST00000492076 613 ntTSL 37.05□□□□□ -1.282e-22■■■■■ 33.2
U2AF2P26368 UFD1-201ENST00000263202 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.788e-9■■■■■ 33.2
U2AF2P26368 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC19.58■□□□□ 0.728e-9■■■■■ 33.2
U2AF2P26368 UFD1-205ENST00000459854 5038 ntTSL 1 (best)10.99□□□□□ -0.658e-9■■■■■ 33.2
U2AF2P26368 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.674e-7■■■■■ 33.2
U2AF2P26368 DHRS1-210ENST00000561273 2027 ntTSL 518.54■□□□□ 0.564e-7■■■■■ 33.2
U2AF2P26368 DHRS1-204ENST00000558340 1623 ntTSL 515.72■□□□□ 0.114e-7■■■■■ 33.2
U2AF2P26368 DHRS1-207ENST00000559483 629 ntTSL 314.9□□□□□ -0.024e-7■■■■■ 33.2
U2AF2P26368 DHRS1-209ENST00000561137 2660 ntTSL 213.88□□□□□ -0.194e-7■■■■■ 33.2
U2AF2P26368 DHRS1-202ENST00000396813 1470 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.314e-7■■■■■ 33.2
U2AF2P26368 MALAT1-212ENST00000618132 725 ntTSL 2 BASIC9.48□□□□□ -0.891e-323■■■■■ 33.2
U2AF2P26368 CTC1-205ENST00000578537 943 ntTSL 514.84□□□□□ -0.031e-8■■■■■ 33.2
U2AF2P26368 PCMTD2-209ENST00000609818 551 ntTSL 47.61□□□□□ -1.194e-8■■■■■ 33.1
U2AF2P26368 SLC25A36-214ENST00000515813 738 ntTSL 220.13■□□□□ 0.811e-7■■■■■ 33.1
U2AF2P26368 HNRNPU-213ENST00000638301 3650 ntTSL 57.76□□□□□ -1.177e-11■■■■■ 33.1
U2AF2P26368 NAB1-207ENST00000426601 545 ntTSL 417.11■□□□□ 0.333e-12■■■■■ 33.1
U2AF2P26368 NAB1-209ENST00000448811 590 ntTSL 412.68□□□□□ -0.383e-12■■■■■ 33.1
U2AF2P26368 NAB1-204ENST00000416973 568 ntTSL 411.67□□□□□ -0.543e-12■■■■■ 33.1
U2AF2P26368 NAB1-206ENST00000423376 438 ntTSL 47.93□□□□□ -1.143e-12■■■■■ 33.1
U2AF2P26368 NAB1-205ENST00000423076 542 ntTSL 27.06□□□□□ -1.283e-12■■■■■ 33.1
U2AF2P26368 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.361e-7■■■■■ 33.1
U2AF2P26368 KTN1-221ENST00000555498 595 ntAPPRIS ALT2 TSL 322.01■■□□□ 1.111e-8■■■■■ 33
U2AF2P26368 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.91e-8■■■■■ 33
U2AF2P26368 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.95■□□□□ 0.621e-8■■■■■ 33
U2AF2P26368 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC18.3■□□□□ 0.521e-8■■■■■ 33
U2AF2P26368 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.451e-8■■■■■ 33
U2AF2P26368 FBXL5-205ENST00000507700 2306 ntTSL 1 (best)16.08■□□□□ 0.171e-8■■■■■ 33
U2AF2P26368 GOLGA2P5-201ENST00000266746 2395 ntBASIC16.02■□□□□ 0.161e-8■■■■■ 33
U2AF2P26368 GOLGA2P5-203ENST00000397112 2632 ntTSL 2 BASIC13.71□□□□□ -0.221e-8■■■■■ 33
U2AF2P26368 GOLGA2P5-204ENST00000421840 2343 ntTSL 1 (best)13.7□□□□□ -0.221e-8■■■■■ 33
U2AF2P26368 GOLGA2P5-207ENST00000546413 2935 nt13.53□□□□□ -0.241e-8■■■■■ 33
U2AF2P26368 SCG5-209ENST00000498607 853 ntTSL 213.39□□□□□ -0.271e-8■■■■■ 33
U2AF2P26368 RIOX2-203ENST00000394198 2341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.291e-8■■■■■ 33
U2AF2P26368 RIOX2-209ENST00000514314 1225 ntTSL 1 (best)12.33□□□□□ -0.441e-8■■■■■ 33
U2AF2P26368 NOL11-207ENST00000581966 476 ntTSL 512.2□□□□□ -0.461e-8■■■■■ 33
U2AF2P26368 NOL11-211ENST00000584942 552 ntTSL 312□□□□□ -0.491e-8■■■■■ 33
U2AF2P26368 SUSD1-205ENST00000415074 842 ntTSL 311.99□□□□□ -0.491e-8■■■■■ 33
U2AF2P26368 LRRC28-221ENST00000561276 967 ntTSL 511.72□□□□□ -0.531e-8■■■■■ 33
U2AF2P26368 LRRC28-216ENST00000559819 2712 ntTSL 211.61□□□□□ -0.551e-8■■■■■ 33
U2AF2P26368 SCG5-208ENST00000498069 612 ntTSL 211.31□□□□□ -0.61e-8■■■■■ 33
U2AF2P26368 SCG5-202ENST00000413748 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC10.58□□□□□ -0.721e-8■■■■■ 33
U2AF2P26368 RIOX2-205ENST00000503517 912 ntTSL 210.3□□□□□ -0.761e-8■■■■■ 33
U2AF2P26368 NOL11-205ENST00000581106 584 ntTSL 310.15□□□□□ -0.781e-8■■■■■ 33
U2AF2P26368 SCG5-204ENST00000471027 659 ntTSL 29.85□□□□□ -0.831e-8■■■■■ 33
U2AF2P26368 SCG5-206ENST00000494364 1148 ntTSL 5 BASIC9.65□□□□□ -0.861e-8■■■■■ 33
U2AF2P26368 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.951e-8■■■■■ 33
U2AF2P26368 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC7.68□□□□□ -1.181e-8■■■■■ 33
U2AF2P26368 SCG5-207ENST00000497208 949 ntTSL 5 BASIC7.64□□□□□ -1.191e-8■■■■■ 33
U2AF2P26368 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC7.53□□□□□ -1.21e-8■■■■■ 33
U2AF2P26368 ARIH2-214ENST00000469038 407 ntTSL 35.98□□□□□ -1.451e-8■■■■■ 33
U2AF2P26368 AC093155.3-201ENST00000370548 2013 ntAPPRIS P1 TSL 2 BASIC5.61□□□□□ -1.511e-8■■■■■ 33
U2AF2P26368 SUSD1-208ENST00000528773 540 ntTSL 45.41□□□□□ -1.541e-8■■■■■ 33
U2AF2P26368 SCG5-203ENST00000470349 401 ntTSL 55.1□□□□□ -1.591e-8■■■■■ 33
U2AF2P26368 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.39□□□□□ -1.711e-8■■■■■ 33
U2AF2P26368 LRRC28-222ENST00000561431 754 ntTSL 33.88□□□□□ -1.791e-8■■■■■ 33
U2AF2P26368 LRRC28-218ENST00000560236 703 ntTSL 42.95□□□□□ -1.941e-8■■■■■ 33
U2AF2P26368 SCG5-205ENST00000475752 867 ntTSL 22.87□□□□□ -1.951e-8■■■■■ 33
U2AF2P26368 FAM204A-205ENST00000467890 775 ntTSL 22.83□□□□□ -1.961e-8■■■■■ 33
U2AF2P26368 CCDC82-205ENST00000530106 3745 ntTSL 22.42□□□□□ -2.021e-8■■■■■ 33
U2AF2P26368 CCDC82-202ENST00000423339 1878 ntAPPRIS P2 TSL 1 (best) BASIC1.99□□□□□ -2.091e-8■■■■■ 33
U2AF2P26368 KTN1-225ENST00000557267 291 ntTSL 31.43□□□□□ -2.181e-8■■■■■ 33
U2AF2P26368 BABAM2-204ENST00000379624 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.057e-9■■■■■ 33
U2AF2P26368 BABAM2-202ENST00000344773 1852 ntTSL 2 BASIC11.36□□□□□ -0.597e-9■■■■■ 33
U2AF2P26368 BABAM2-201ENST00000342045 1681 ntAPPRIS P1 TSL 1 (best) BASIC8□□□□□ -1.137e-9■■■■■ 33
U2AF2P26368 BABAM2-203ENST00000361704 1686 ntTSL 1 (best) BASIC8□□□□□ -1.137e-9■■■■■ 33
U2AF2P26368 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC7.46□□□□□ -1.217e-9■■■■■ 33
U2AF2P26368 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.97e-8■■■■■ 33
U2AF2P26368 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.597e-8■■■■■ 33
U2AF2P26368 ARID1A-212ENST00000636219 7058 ntAPPRIS ALT2 TSL 512.78□□□□□ -0.367e-8■■■■■ 33
U2AF2P26368 ARID1A-204ENST00000430799 6521 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.477e-8■■■■■ 33
U2AF2P26368 ARID1A-202ENST00000374152 6460 ntAPPRIS ALT2 TSL 5 BASIC10.19□□□□□ -0.787e-8■■■■■ 33
U2AF2P26368 MGEA5-210ENST00000492204 519 ntTSL 27.4□□□□□ -1.222e-10■■■■■ 33
U2AF2P26368 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC27.34■■□□□ 1.978e-9■■■■■ 32.9
U2AF2P26368 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC26.81■■□□□ 1.888e-9■■■■■ 32.9
U2AF2P26368 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC17.62■□□□□ 0.418e-9■■■■■ 32.9
U2AF2P26368 SPIRE1-204ENST00000440472 2109 ntTSL 1 (best)9.55□□□□□ -0.888e-9■■■■■ 32.9
U2AF2P26368 SPIRE1-208ENST00000464481 1264 ntTSL 59.47□□□□□ -0.898e-9■■■■■ 32.9
U2AF2P26368 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC8.6□□□□□ -1.038e-9■■■■■ 32.9
Retrieved 100 of 36,523 protein–RNA pairs in 947.8 ms