Protein–RNA interactions for Protein: Q8WXD9

CASKIN1, Caskin-1, humanhuman

Predictions only

Length 1,431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CASKIN1Q8WXD9 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 TP53I3-201ENST00000238721 1998 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 FOXO3B-201ENST00000395675 1928 ntBASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC37.29■■■■□ 3.56
CASKIN1Q8WXD9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC37.28■■■■□ 3.56
CASKIN1Q8WXD9 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC37.28■■■■□ 3.56
CASKIN1Q8WXD9 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC37.28■■■■□ 3.56
CASKIN1Q8WXD9 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC37.28■■■■□ 3.56
CASKIN1Q8WXD9 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC37.28■■■■□ 3.56
CASKIN1Q8WXD9 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CASKIN1Q8WXD9 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CASKIN1Q8WXD9 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC37.27■■■■□ 3.56
CASKIN1Q8WXD9 WBP1-203ENST00000409737 1110 ntAPPRIS ALT1 TSL 5 BASIC37.27■■■■□ 3.56
CASKIN1Q8WXD9 FBRSL1-201ENST00000434748 5568 ntAPPRIS P2 TSL 1 (best) BASIC37.26■■■■□ 3.56
CASKIN1Q8WXD9 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC37.26■■■■□ 3.56
CASKIN1Q8WXD9 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.56
CASKIN1Q8WXD9 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC37.26■■■■□ 3.55
CASKIN1Q8WXD9 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC37.26■■■■□ 3.55
CASKIN1Q8WXD9 AC019069.1-201ENST00000610008 1333 ntBASIC37.25■■■■□ 3.55
CASKIN1Q8WXD9 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC37.25■■■■□ 3.55
CASKIN1Q8WXD9 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC37.25■■■■□ 3.55
CASKIN1Q8WXD9 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC37.25■■■■□ 3.55
CASKIN1Q8WXD9 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC37.24■■■■□ 3.55
CASKIN1Q8WXD9 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC37.24■■■■□ 3.55
CASKIN1Q8WXD9 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC37.24■■■■□ 3.55
CASKIN1Q8WXD9 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC37.23■■■■□ 3.55
CASKIN1Q8WXD9 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC37.23■■■■□ 3.55
CASKIN1Q8WXD9 AC131281.2-201ENST00000520478 145 ntBASIC37.23■■■■□ 3.55
CASKIN1Q8WXD9 ERN1-208ENST00000606895 2068 ntBASIC37.23■■■■□ 3.55
CASKIN1Q8WXD9 LCNL1-201ENST00000408973 1839 ntAPPRIS P1 TSL 2 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 SERF1A-202ENST00000354833 1889 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 SERF1B-201ENST00000380750 1889 ntTSL 1 (best) BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC37.22■■■■□ 3.55
CASKIN1Q8WXD9 PKM-203ENST00000389093 2279 ntTSL 5 BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 KAT5-208ENST00000530446 1697 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC37.21■■■■□ 3.55
CASKIN1Q8WXD9 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC37.2■■■■□ 3.55
CASKIN1Q8WXD9 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC37.2■■■■□ 3.55
CASKIN1Q8WXD9 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC37.2■■■■□ 3.55
CASKIN1Q8WXD9 AL117332.1-201ENST00000622628 974 ntBASIC37.19■■■■□ 3.54
CASKIN1Q8WXD9 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC37.18■■■■□ 3.54
CASKIN1Q8WXD9 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 AC008406.3-201ENST00000620001 1374 ntBASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 TK2-202ENST00000417693 1046 ntTSL 2 BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC37.17■■■■□ 3.54
CASKIN1Q8WXD9 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC37.16■■■■□ 3.54
CASKIN1Q8WXD9 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC37.16■■■■□ 3.54
CASKIN1Q8WXD9 LSM4-201ENST00000252816 986 ntTSL 2 BASIC37.16■■■■□ 3.54
CASKIN1Q8WXD9 AC010501.1-201ENST00000606270 1962 ntBASIC37.16■■■■□ 3.54
CASKIN1Q8WXD9 TCEA1-211ENST00000522635 1432 ntTSL 2 BASIC37.15■■■■□ 3.54
CASKIN1Q8WXD9 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CASKIN1Q8WXD9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC37.15■■■■□ 3.54
CASKIN1Q8WXD9 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC37.14■■■■□ 3.54
CASKIN1Q8WXD9 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC37.14■■■■□ 3.54
CASKIN1Q8WXD9 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC37.14■■■■□ 3.54
CASKIN1Q8WXD9 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
CASKIN1Q8WXD9 PEMT-206ENST00000435340 960 ntTSL 5 BASIC37.13■■■■□ 3.53
CASKIN1Q8WXD9 MTDHP2-201ENST00000601468 714 ntBASIC37.13■■■■□ 3.53
CASKIN1Q8WXD9 AC010997.5-201ENST00000609182 354 ntBASIC37.13■■■■□ 3.53
CASKIN1Q8WXD9 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC37.13■■■■□ 3.53
CASKIN1Q8WXD9 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC37.12■■■■□ 3.53
CASKIN1Q8WXD9 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CASKIN1Q8WXD9 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CASKIN1Q8WXD9 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CASKIN1Q8WXD9 YRDC-201ENST00000373044 1826 ntAPPRIS P1 TSL 1 (best) BASIC37.12■■■■□ 3.53
CASKIN1Q8WXD9 PPP1CC-206ENST00000550991 1882 ntTSL 2 BASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 MIR6724-1-201ENST00000616420 92 ntBASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 MIR6724-2-201ENST00000616483 92 ntBASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 MIR6724-4-201ENST00000617390 92 ntBASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 MIR6724-3-201ENST00000622482 92 ntBASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC37.11■■■■□ 3.53
CASKIN1Q8WXD9 TRIR-202ENST00000588213 841 ntTSL 3 BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 PHF11-202ENST00000378319 1359 ntAPPRIS P3 TSL 1 (best) BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 AC097639.1-201ENST00000565519 1891 ntBASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 AC093762.1-201ENST00000641981 837 ntAPPRIS P1 BASIC37.1■■■■□ 3.53
CASKIN1Q8WXD9 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC37.09■■■■□ 3.53
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms