Protein–RNA interactions for Protein: Q8NAV1

PRPF38A, Pre-mRNA-splicing factor 38A, humanhuman

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38AQ8NAV1 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC27.39■■□□□ 1.97
PRPF38AQ8NAV1 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PRPF38AQ8NAV1 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC27.39■■□□□ 1.97
PRPF38AQ8NAV1 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
PRPF38AQ8NAV1 FOXO3B-201ENST00000395675 1928 ntBASIC27.38■■□□□ 1.97
PRPF38AQ8NAV1 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC27.38■■□□□ 1.97
PRPF38AQ8NAV1 AC092028.1-203ENST00000608262 953 ntBASIC27.38■■□□□ 1.97
PRPF38AQ8NAV1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC27.38■■□□□ 1.97
PRPF38AQ8NAV1 WIPI2-204ENST00000404704 1663 ntTSL 5 BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 KLHL26-202ENST00000595182 522 ntTSL 4 BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 ERN1-208ENST00000606895 2068 ntBASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
PRPF38AQ8NAV1 HMGA2-202ENST00000393577 611 ntTSL 3 BASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 AC090587.2-201ENST00000430222 527 ntTSL 2 BASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 KRT16P3-201ENST00000439127 1283 ntBASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
PRPF38AQ8NAV1 AC096887.2-201ENST00000623443 1957 ntBASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 FEZ1-202ENST00000366139 1053 ntTSL 2 BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 MDK-202ENST00000395565 951 ntAPPRIS P2 TSL 2 BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC27.35■■□□□ 1.97
PRPF38AQ8NAV1 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 ZNF428-201ENST00000300811 1412 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 TSPY9P-201ENST00000440215 945 ntBASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 TSPY11P-201ENST00000442607 1045 ntBASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 AC073934.1-201ENST00000490314 495 ntTSL 4 BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 PLEKHJ1-213ENST00000591099 1092 ntTSL 2 BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 GATA4-209ENST00000622443 1982 ntTSL 5 BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC27.34■■□□□ 1.97
PRPF38AQ8NAV1 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 PCMTD2-202ENST00000299468 1049 ntTSL 5 BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 AL117209.1-201ENST00000560931 828 ntTSL 3 BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 AC135731.1-201ENST00000569415 2548 ntBASIC27.33■■□□□ 1.97
PRPF38AQ8NAV1 SRP68-202ENST00000539137 2386 ntTSL 2 BASIC27.33■■□□□ 1.96
PRPF38AQ8NAV1 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PRPF38AQ8NAV1 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PRPF38AQ8NAV1 HTRA1-201ENST00000368984 2120 ntAPPRIS P1 TSL 1 (best) BASIC27.32■■□□□ 1.96
PRPF38AQ8NAV1 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC27.32■■□□□ 1.96
PRPF38AQ8NAV1 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC27.32■■□□□ 1.96
PRPF38AQ8NAV1 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 NAA30-203ENST00000555166 1294 ntAPPRIS ALT2 TSL 2 BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 AC097639.1-201ENST00000565519 1891 ntBASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 ZNF747-203ENST00000568028 1511 ntAPPRIS P1 TSL 2 BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 FHL2-203ENST00000358129 1578 ntTSL 5 BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 MAPKAP1-207ENST00000394060 1586 ntTSL 1 (best) BASIC27.31■■□□□ 1.96
PRPF38AQ8NAV1 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
PRPF38AQ8NAV1 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC27.3■■□□□ 1.96
PRPF38AQ8NAV1 TMEM165-204ENST00000506198 828 ntTSL 2 BASIC27.3■■□□□ 1.96
PRPF38AQ8NAV1 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 BIN1-211ENST00000409400 2143 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 MTURN-203ENST00000409688 843 ntTSL 2 BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 FEZ2-204ENST00000405912 1931 ntTSL 1 (best) BASIC27.29■■□□□ 1.96
PRPF38AQ8NAV1 AL121749.1-202ENST00000609313 2153 ntBASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 ZNF419-210ENST00000520540 568 ntTSL 4 BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 AC010501.1-201ENST00000606270 1962 ntBASIC27.28■■□□□ 1.96
PRPF38AQ8NAV1 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC27.27■■□□□ 1.96
PRPF38AQ8NAV1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRPF38AQ8NAV1 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC27.27■■□□□ 1.96
PRPF38AQ8NAV1 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 SENP5-202ENST00000419026 973 ntTSL 3 BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
PRPF38AQ8NAV1 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 AC008406.3-201ENST00000620001 1374 ntBASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 TK2-202ENST00000417693 1046 ntTSL 2 BASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 CHST13-201ENST00000319340 1789 ntAPPRIS P1 TSL 1 (best) BASIC27.25■■□□□ 1.95
PRPF38AQ8NAV1 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
PRPF38AQ8NAV1 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC27.24■■□□□ 1.95
PRPF38AQ8NAV1 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC27.24■■□□□ 1.95
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms