Protein–RNA interactions for Protein: O43623

SNAI2, Zinc finger protein SNAI2, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNAI2O43623 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
SNAI2O43623 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
SNAI2O43623 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
SNAI2O43623 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.45■□□□□ 0.38
SNAI2O43623 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
SNAI2O43623 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 TMEM256-PLSCR3-204ENST00000573331 2557 ntAPPRIS P5 TSL 2 BASIC17.45■□□□□ 0.38
SNAI2O43623 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
SNAI2O43623 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAI2O43623 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L13-201ENST00000554103 1267 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L15-201ENST00000611059 1267 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L23-201ENST00000615195 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L24-201ENST00000617576 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L22-201ENST00000618238 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L20-201ENST00000619712 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L21-201ENST00000622058 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L10-201ENST00000622460 1267 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 DUX4L25-201ENST00000624915 1269 ntBASIC17.44■□□□□ 0.38
SNAI2O43623 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
SNAI2O43623 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
SNAI2O43623 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
SNAI2O43623 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 CHST11-202ENST00000546689 756 ntTSL 2 BASIC17.43■□□□□ 0.38
SNAI2O43623 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 SLC6A10P-202ENST00000431994 2058 ntBASIC17.43■□□□□ 0.38
SNAI2O43623 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
SNAI2O43623 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
SNAI2O43623 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 ERF-201ENST00000222329 2698 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC17.42■□□□□ 0.38
SNAI2O43623 AC141586.4-201ENST00000624558 1573 ntBASIC17.42■□□□□ 0.38
SNAI2O43623 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC17.42■□□□□ 0.38
SNAI2O43623 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.42■□□□□ 0.38
SNAI2O43623 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
SNAI2O43623 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
SNAI2O43623 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
SNAI2O43623 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC17.41■□□□□ 0.38
SNAI2O43623 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC17.41■□□□□ 0.38
SNAI2O43623 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC17.41■□□□□ 0.38
SNAI2O43623 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
SNAI2O43623 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
SNAI2O43623 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 PKD1P6-201ENST00000343738 4769 ntBASIC17.4■□□□□ 0.38
SNAI2O43623 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC17.4■□□□□ 0.38
SNAI2O43623 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC17.4■□□□□ 0.38
SNAI2O43623 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.4■□□□□ 0.38
SNAI2O43623 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
SNAI2O43623 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC17.4■□□□□ 0.38
SNAI2O43623 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
SNAI2O43623 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC17.39■□□□□ 0.38
SNAI2O43623 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNAI2O43623 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.39■□□□□ 0.37
SNAI2O43623 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.39■□□□□ 0.37
SNAI2O43623 NPAS3-210ENST00000551492 2817 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
SNAI2O43623 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
SNAI2O43623 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
SNAI2O43623 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
SNAI2O43623 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms