Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC44A1Q8WWI5 NPEPL1-201ENST00000356091 2378 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC44A1Q8WWI5 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC44A1Q8WWI5 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC44A1Q8WWI5 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
SLC44A1Q8WWI5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 MIR3648-2-201ENST00000581792 180 ntBASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 MIR3648-1-201ENST00000615959 180 ntBASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
SLC44A1Q8WWI5 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 MDFIC-206ENST00000448022 484 ntTSL 2 BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 AC141586.4-201ENST00000624558 1573 ntBASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 GDI1-215ENST00000630693 786 ntTSL 4 BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
SLC44A1Q8WWI5 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
SLC44A1Q8WWI5 POTEF-201ENST00000361163 1586 ntTSL 5 BASIC23.79■■□□□ 1.4
SLC44A1Q8WWI5 AL157400.5-201ENST00000507624 621 ntBASIC23.79■■□□□ 1.4
SLC44A1Q8WWI5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC23.79■■□□□ 1.4
SLC44A1Q8WWI5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 MACF1-219ENST00000484793 834 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 PFN2-211ENST00000489155 636 ntTSL 4 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 TARSL2-207ENST00000615656 2356 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
SLC44A1Q8WWI5 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 THRA-201ENST00000264637 2538 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 NAB1-202ENST00000409581 2360 ntAPPRIS P3 TSL 2 BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 AC025884.2-201ENST00000553429 711 ntBASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 METRNL-202ENST00000570778 967 ntTSL 5 BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC23.77■■□□□ 1.4
SLC44A1Q8WWI5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 KCNQ3-202ENST00000519445 2801 ntAPPRIS ALT2 TSL 5 BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 PTGER1-201ENST00000292513 1421 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
SLC44A1Q8WWI5 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 DGAT1-201ENST00000332324 1473 ntTSL 5 BASIC23.75■■□□□ 1.39
SLC44A1Q8WWI5 TANGO2-204ENST00000401833 1920 ntTSL 5 BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 ARHGDIA-203ENST00000541078 1517 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 GRK4-204ENST00000503518 2136 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 MIR1-1HG-202ENST00000624914 1220 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 BARX1-202ENST00000401724 1323 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.74■■□□□ 1.39
SLC44A1Q8WWI5 PGF-203ENST00000553716 1699 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 MIR7108-201ENST00000614319 87 ntBASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 RAD51-208ENST00000532743 1515 ntTSL 2 BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
SLC44A1Q8WWI5 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 THRA-209ENST00000584985 2421 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 WRNIP1-205ENST00000618555 2651 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
SLC44A1Q8WWI5 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC23.71■■□□□ 1.39
SLC44A1Q8WWI5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC23.71■■□□□ 1.39
SLC44A1Q8WWI5 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC23.71■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms