Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 PCYT2-202ENST00000538721 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CMC4P56277 GTPBP3-202ENST00000358792 1951 ntAPPRIS P4 TSL 2 BASIC17.7■□□□□ 0.42
CMC4P56277 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CMC4P56277 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 ERN1-208ENST00000606895 2068 ntBASIC17.69■□□□□ 0.42
CMC4P56277 PKNOX2-AS1-201ENST00000532316 586 ntTSL 3 BASIC17.69■□□□□ 0.42
CMC4P56277 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC17.69■□□□□ 0.42
CMC4P56277 P2RX4-203ENST00000359949 1836 ntTSL 5 BASIC17.69■□□□□ 0.42
CMC4P56277 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC17.69■□□□□ 0.42
CMC4P56277 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC17.69■□□□□ 0.42
CMC4P56277 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CMC4P56277 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CMC4P56277 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
CMC4P56277 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 MED22-201ENST00000343730 1437 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 IDNK-201ENST00000376417 511 ntTSL 5 BASIC17.68■□□□□ 0.42
CMC4P56277 IDNK-202ENST00000376419 692 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 RASGRP2-204ENST00000377487 642 ntTSL 2 BASIC17.68■□□□□ 0.42
CMC4P56277 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CMC4P56277 C9orf147-202ENST00000457681 561 ntTSL 2 BASIC17.68■□□□□ 0.42
CMC4P56277 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC17.68■□□□□ 0.42
CMC4P56277 EGFL8-220ENST00000395512 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CMC4P56277 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 CD63-201ENST00000257857 1070 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 YBX1P4-201ENST00000392794 808 ntBASIC17.67■□□□□ 0.42
CMC4P56277 EME2-205ENST00000568449 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC17.67■□□□□ 0.42
CMC4P56277 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC17.67■□□□□ 0.42
CMC4P56277 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CMC4P56277 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC17.66■□□□□ 0.42
CMC4P56277 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMC4P56277 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CMC4P56277 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CMC4P56277 AC148477.1-201ENST00000537720 476 ntTSL 3 BASIC17.66■□□□□ 0.42
CMC4P56277 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC17.66■□□□□ 0.42
CMC4P56277 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CMC4P56277 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 FBXL8-201ENST00000258200 1658 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 FKBP1B-202ENST00000380991 1010 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC17.65■□□□□ 0.42
CMC4P56277 SSSCA1-AS1-201ENST00000567594 614 ntBASIC17.65■□□□□ 0.42
CMC4P56277 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC17.65■□□□□ 0.42
CMC4P56277 AC096887.2-201ENST00000623443 1957 ntBASIC17.65■□□□□ 0.42
CMC4P56277 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CMC4P56277 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CMC4P56277 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC17.64■□□□□ 0.41
CMC4P56277 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC17.64■□□□□ 0.41
CMC4P56277 CAPZB-203ENST00000375142 1686 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CMC4P56277 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CMC4P56277 NFU1-203ENST00000410022 1467 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMC4P56277 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMC4P56277 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CMC4P56277 GSK3A-201ENST00000222330 2188 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CMC4P56277 FBXO7-206ENST00000452138 1535 ntTSL 2 BASIC17.63■□□□□ 0.41
CMC4P56277 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CMC4P56277 MIR4508-201ENST00000584178 70 ntBASIC17.63■□□□□ 0.41
CMC4P56277 AC010980.1-201ENST00000587192 1142 ntBASIC17.63■□□□□ 0.41
CMC4P56277 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC17.63■□□□□ 0.41
CMC4P56277 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CMC4P56277 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
CMC4P56277 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CMC4P56277 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMC4P56277 ACSS1-202ENST00000376726 2244 ntTSL 2 BASIC17.62■□□□□ 0.41
CMC4P56277 VSTM2A-202ENST00000402613 1076 ntTSL 2 BASIC17.62■□□□□ 0.41
CMC4P56277 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMC4P56277 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMC4P56277 RINL-202ENST00000591812 1910 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CMC4P56277 KCNQ5-208ENST00000414165 6236 ntTSL 5 BASIC17.62■□□□□ 0.41
CMC4P56277 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CMC4P56277 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 PPM1J-201ENST00000309276 1863 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC17.61■□□□□ 0.41
CMC4P56277 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CMC4P56277 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CMC4P56277 GNG4-203ENST00000391854 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CMC4P56277 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.3 ms