Protein–RNA interactions for Protein: P13500

CCL2, C-C motif chemokine 2, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL2P13500 RPS2P7-201ENST00000447334 885 ntBASIC20.68■□□□□ 0.9
CCL2P13500 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL2P13500 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
CCL2P13500 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.68■□□□□ 0.9
CCL2P13500 ATG16L2-201ENST00000321297 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
CCL2P13500 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 PYY2-202ENST00000441253 1076 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 SMKR1-201ENST00000462322 1035 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC20.67■□□□□ 0.9
CCL2P13500 BHLHE23-202ENST00000612929 1109 ntBASIC20.67■□□□□ 0.9
CCL2P13500 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 RBFOX2-209ENST00000438146 1356 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
CCL2P13500 MROH6-210ENST00000533679 1921 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL2P13500 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
CCL2P13500 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL2P13500 AC139795.1-202ENST00000500444 432 ntBASIC20.66■□□□□ 0.9
CCL2P13500 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
CCL2P13500 AC020928.2-201ENST00000588717 2197 ntBASIC20.66■□□□□ 0.9
CCL2P13500 FCRLB-205ENST00000367948 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL2P13500 UBE2E3-202ENST00000410062 1570 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL2P13500 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC20.65■□□□□ 0.9
CCL2P13500 LMAN2-208ENST00000515209 1149 ntAPPRIS ALT2 TSL 3 BASIC20.65■□□□□ 0.9
CCL2P13500 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL2P13500 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
CCL2P13500 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.65■□□□□ 0.9
CCL2P13500 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCL2P13500 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
CCL2P13500 MTERF3-204ENST00000523821 1529 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
CCL2P13500 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCL2P13500 KRT18P10-201ENST00000388836 1287 ntBASIC20.64■□□□□ 0.89
CCL2P13500 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
CCL2P13500 AC087393.1-201ENST00000582896 145 ntBASIC20.64■□□□□ 0.89
CCL2P13500 CASTOR2-201ENST00000616305 1257 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
CCL2P13500 PLEKHO1-202ENST00000369126 1809 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
CCL2P13500 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL2P13500 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL2P13500 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL2P13500 HYI-210ENST00000486909 905 ntTSL 5 BASIC20.63■□□□□ 0.89
CCL2P13500 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC20.63■□□□□ 0.89
CCL2P13500 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CCL2P13500 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CCL2P13500 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL2P13500 CCR10-201ENST00000332438 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 MPST-203ENST00000401419 1345 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 HAS1-205ENST00000601714 2086 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 PFDN2-201ENST00000368010 677 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 AL354928.1-201ENST00000438380 617 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL2P13500 HERC2P9-201ENST00000507787 1023 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 AC139795.1-203ENST00000515045 853 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL2P13500 DSG2-202ENST00000585206 1081 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL2P13500 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC20.62■□□□□ 0.89
CCL2P13500 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CCL2P13500 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL2P13500 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL2P13500 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC20.61■□□□□ 0.89
CCL2P13500 KAT8-206ENST00000543774 1846 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
CCL2P13500 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CCL2P13500 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL2P13500 CENPVL1-201ENST00000602548 1620 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCL2P13500 CENPVL2-201ENST00000634648 1620 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CCL2P13500 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL2P13500 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL2P13500 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC20.6■□□□□ 0.89
CCL2P13500 AC010980.1-201ENST00000587192 1142 ntBASIC20.6■□□□□ 0.89
CCL2P13500 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL2P13500 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL2P13500 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC20.6■□□□□ 0.89
CCL2P13500 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CCL2P13500 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
CCL2P13500 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
CCL2P13500 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC20.59■□□□□ 0.89
CCL2P13500 FGD5-AS1-204ENST00000430166 1184 ntTSL 2 BASIC20.59■□□□□ 0.89
CCL2P13500 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
CCL2P13500 FGF22-202ENST00000586042 1288 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
CCL2P13500 AC064853.2-201ENST00000641246 144 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
CCL2P13500 GPR160-201ENST00000355897 2039 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL2P13500 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.58■□□□□ 0.89
CCL2P13500 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL2P13500 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL2P13500 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL2P13500 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
CCL2P13500 PROSER2-202ENST00000379200 1232 ntAPPRIS ALT2 BASIC20.58■□□□□ 0.89
CCL2P13500 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC20.58■□□□□ 0.89
CCL2P13500 DUSP22-201ENST00000344450 1485 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL2P13500 SLC6A10P-202ENST00000431994 2058 ntBASIC20.57■□□□□ 0.88
CCL2P13500 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL2P13500 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
CCL2P13500 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC20.57■□□□□ 0.88
CCL2P13500 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC20.57■□□□□ 0.88
CCL2P13500 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.57■□□□□ 0.88
CCL2P13500 AC116025.2-201ENST00000576632 443 ntTSL 3 BASIC20.57■□□□□ 0.88
CCL2P13500 HSF1-204ENST00000528838 2142 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
CCL2P13500 AC145124.1-201ENST00000528514 1361 ntTSL 2 BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 62.5 ms