Protein–RNA interactions for Protein: Q9NUP1

BLOC1S4, Biogenesis of lysosome-related organelles complex 1 subunit 4, humanhuman

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BLOC1S4Q9NUP1 SOCS2-202ENST00000536696 1065 ntAPPRIS P1 TSL 2 BASIC26.72■■□□□ 1.87
BLOC1S4Q9NUP1 ABHD17AP5-201ENST00000580133 923 ntBASIC26.72■■□□□ 1.87
BLOC1S4Q9NUP1 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC26.72■■□□□ 1.87
BLOC1S4Q9NUP1 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 ARRB2-210ENST00000572457 1660 ntTSL 5 BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 CDK9-201ENST00000373264 2463 ntAPPRIS P1 TSL 1 (best) BASIC26.71■■□□□ 1.87
BLOC1S4Q9NUP1 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC26.7■■□□□ 1.87
BLOC1S4Q9NUP1 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC26.7■■□□□ 1.87
BLOC1S4Q9NUP1 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC26.7■■□□□ 1.87
BLOC1S4Q9NUP1 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC26.7■■□□□ 1.86
BLOC1S4Q9NUP1 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC26.7■■□□□ 1.86
BLOC1S4Q9NUP1 GNAS-AS1_1.1-201ENST00000621898 103 ntBASIC26.7■■□□□ 1.86
BLOC1S4Q9NUP1 MEIS3-204ENST00000558555 1715 ntAPPRIS ALT2 TSL 5 BASIC26.7■■□□□ 1.86
BLOC1S4Q9NUP1 KRT18P60-201ENST00000312876 1297 ntBASIC26.69■■□□□ 1.86
BLOC1S4Q9NUP1 MBD3-202ENST00000434436 2439 ntAPPRIS P1 TSL 1 (best) BASIC26.69■■□□□ 1.86
BLOC1S4Q9NUP1 RRP9-201ENST00000232888 1578 ntAPPRIS P1 TSL 1 (best) BASIC26.68■■□□□ 1.86
BLOC1S4Q9NUP1 AC138647.1-201ENST00000427937 648 ntAPPRIS P1 TSL 5 BASIC26.68■■□□□ 1.86
BLOC1S4Q9NUP1 PTPMT1-205ENST00000534775 1611 ntTSL 1 (best) BASIC26.68■■□□□ 1.86
BLOC1S4Q9NUP1 LHX3-201ENST00000371746 2403 ntAPPRIS P1 TSL 1 (best) BASIC26.67■■□□□ 1.86
BLOC1S4Q9NUP1 TMEM221-201ENST00000341130 1930 ntAPPRIS P1 TSL 2 BASIC26.67■■□□□ 1.86
BLOC1S4Q9NUP1 AKT1S1-203ENST00000391831 2025 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 HAS2-AS1-201ENST00000514180 1656 ntTSL 1 (best) BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 SHISA8-202ENST00000621082 1405 ntAPPRIS P2 TSL 5 BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 FAM118A-205ENST00000441876 1776 ntAPPRIS P1 TSL 1 (best) BASIC26.66■■□□□ 1.86
BLOC1S4Q9NUP1 NAT14-201ENST00000205194 1536 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BLOC1S4Q9NUP1 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
BLOC1S4Q9NUP1 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC26.65■■□□□ 1.86
BLOC1S4Q9NUP1 RING1-201ENST00000374656 1752 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BLOC1S4Q9NUP1 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
BLOC1S4Q9NUP1 GTPBP3-203ENST00000361619 1894 ntTSL 2 BASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 DUX4L9-201ENST00000449051 1259 ntBASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 NTF6A-201ENST00000591175 560 ntBASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 AC129492.7-201ENST00000622992 756 ntBASIC26.64■■□□□ 1.86
BLOC1S4Q9NUP1 SPIRE2-205ENST00000563972 1823 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
BLOC1S4Q9NUP1 HOXA4-204ENST00000610970 1728 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
BLOC1S4Q9NUP1 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
BLOC1S4Q9NUP1 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC26.63■■□□□ 1.85
BLOC1S4Q9NUP1 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC26.63■■□□□ 1.85
BLOC1S4Q9NUP1 YWHAH-202ENST00000397492 1879 ntTSL 3 BASIC26.63■■□□□ 1.85
BLOC1S4Q9NUP1 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC26.63■■□□□ 1.85
BLOC1S4Q9NUP1 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 OSCAR-202ENST00000351806 1375 ntAPPRIS ALT2 TSL 1 (best) BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 ZNF365-206ENST00000395255 1674 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
BLOC1S4Q9NUP1 C8orf58-201ENST00000289989 2016 ntAPPRIS P3 TSL 5 BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 SLC6A10P-202ENST00000431994 2058 ntBASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 AMIGO1-201ENST00000369862 2229 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 FAM159A-204ENST00000517870 748 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 NKX2-5-204ENST00000521848 1027 ntTSL 2 BASIC26.61■■□□□ 1.85
BLOC1S4Q9NUP1 SNX21-204ENST00000372542 1824 ntAPPRIS P1 TSL 2 BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 RBFA-201ENST00000262197 1219 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 FAM98C-202ENST00000343358 1006 ntTSL 1 (best) BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 TBC1D10A-201ENST00000215790 2077 ntAPPRIS P3 TSL 1 (best) BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 SRR-201ENST00000344595 2728 ntAPPRIS P1 TSL 1 (best) BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC26.6■■□□□ 1.85
BLOC1S4Q9NUP1 SCTR-201ENST00000019103 1865 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BLOC1S4Q9NUP1 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
BLOC1S4Q9NUP1 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
BLOC1S4Q9NUP1 DYRK2-203ENST00000393555 2209 ntAPPRIS ALT1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 ZNF263-204ENST00000573578 1636 ntTSL 5 BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 RNF166-201ENST00000312838 1883 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 RBM42-205ENST00000589871 1487 ntTSL 5 BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 MPC1-201ENST00000341756 976 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 MPC1-206ENST00000621630 977 ntAPPRIS ALT1 TSL 5 BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 MPC1-207ENST00000621685 1192 ntTSL 5 BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 ST6GALNAC2-201ENST00000225276 2170 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 AC022211.4-201ENST00000625094 2161 ntBASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
BLOC1S4Q9NUP1 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 MAZ-203ENST00000545521 2333 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 C16orf87-201ENST00000285697 1585 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
BLOC1S4Q9NUP1 EIF5A-211ENST00000576930 1439 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 RABL6-204ENST00000371671 1580 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 AC018755.3-202ENST00000596210 929 ntBASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 HMX2-201ENST00000339992 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 ARHGAP29-202ENST00000370217 2043 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
BLOC1S4Q9NUP1 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC26.56■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 11.8 ms