Protein–RNA interactions for Protein: P40965

MSH4, MutS protein homolog 4, yeastyeast

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH4P40965 DFR1YOR236W 636 nt7.44□□□□□ -1.22
MSH4P40965 RAP1YNL216W 2484 nt7.43□□□□□ -1.22
MSH4P40965 TIM22YDL217C 624 nt7.43□□□□□ -1.22
MSH4P40965 FAL1YDR021W 1200 nt7.43□□□□□ -1.22
MSH4P40965 MMS2YGL087C 414 nt7.43□□□□□ -1.22
MSH4P40965 THI4YGR144W 981 nt7.43□□□□□ -1.22
MSH4P40965 MHO1YJR008W 1017 nt7.43□□□□□ -1.22
MSH4P40965 OMA1YKR087C 1038 nt7.43□□□□□ -1.22
MSH4P40965 FPR3YML074C 1236 nt7.43□□□□□ -1.22
MSH4P40965 MSO1YNR049C 633 nt7.43□□□□□ -1.22
MSH4P40965 TSR3YOR006C 942 nt7.43□□□□□ -1.22
MSH4P40965 PEX3YDR329C 1326 nt7.43□□□□□ -1.22
MSH4P40965 RIO1YOR119C 1455 nt7.43□□□□□ -1.22
MSH4P40965 MPA43YNL249C 1629 nt7.42□□□□□ -1.22
MSH4P40965 YGL188CYGL188C 174 nt7.42□□□□□ -1.22
MSH4P40965 YET2YMR040W 483 nt7.42□□□□□ -1.22
MSH4P40965 RRP40YOL142W 723 nt7.42□□□□□ -1.22
MSH4P40965 YPL257WYPL257W 582 nt7.42□□□□□ -1.22
MSH4P40965 SGF29YCL010C 780 nt7.42□□□□□ -1.22
MSH4P40965 ERG1YGR175C 1491 nt7.42□□□□□ -1.22
MSH4P40965 YPR204WYPR204W 3099 nt7.41□□□□□ -1.22
MSH4P40965 YDL023CYDL023C 321 nt7.41□□□□□ -1.22
MSH4P40965 YHL044WYHL044W 708 nt7.41□□□□□ -1.22
MSH4P40965 YHR022CYHR022C 771 nt7.41□□□□□ -1.22
MSH4P40965 YHR054CYHR054C 1065 nt7.41□□□□□ -1.22
MSH4P40965 MOG1YJR074W 657 nt7.41□□□□□ -1.22
MSH4P40965 YJR146WYJR146W 354 nt7.41□□□□□ -1.22
MSH4P40965 VPS24YKL041W 675 nt7.41□□□□□ -1.22
MSH4P40965 SRL2YLR082C 1179 nt7.41□□□□□ -1.22
MSH4P40965 ISA2YPR067W 558 nt7.41□□□□□ -1.22
MSH4P40965 YMR027WYMR027W 1413 nt7.41□□□□□ -1.22
MSH4P40965 YUR1YJL139C 1287 nt7.4□□□□□ -1.22
MSH4P40965 ADD66YKL206C 804 nt7.4□□□□□ -1.22
MSH4P40965 PSR2YLR019W 1194 nt7.4□□□□□ -1.22
MSH4P40965 RSA3YLR221C 663 nt7.4□□□□□ -1.22
MSH4P40965 DSC2YOL073C 969 nt7.4□□□□□ -1.22
MSH4P40965 GUF1YLR289W 1938 nt7.4□□□□□ -1.23
MSH4P40965 JIP4YDR475C 2631 nt7.39□□□□□ -1.23
MSH4P40965 DIT1YDR403W 1611 nt7.39□□□□□ -1.23
MSH4P40965 IVY1YDR229W 1362 nt7.39□□□□□ -1.23
MSH4P40965 MIA40YKL195W 1212 nt7.39□□□□□ -1.23
MSH4P40965 AAT2YLR027C 1257 nt7.39□□□□□ -1.23
MSH4P40965 YLR169WYLR169W 354 nt7.39□□□□□ -1.23
MSH4P40965 OGG1YML060W 1131 nt7.39□□□□□ -1.23
MSH4P40965 GFD1YMR255W 567 nt7.39□□□□□ -1.23
MSH4P40965 KSH1YNL024C-A 219 nt7.39□□□□□ -1.23
MSH4P40965 UIP4YPL186C 915 nt7.39□□□□□ -1.23
MSH4P40965 DEF1YKL054C 2217 nt7.39□□□□□ -1.23
MSH4P40965 EDE1YBL047C 4146 nt7.38□□□□□ -1.23
MSH4P40965 BSC5YNR069C 1470 nt7.38□□□□□ -1.23
MSH4P40965 Q0142Q0142 177 nt7.38□□□□□ -1.23
MSH4P40965 JJJ3YJR097W 519 nt7.38□□□□□ -1.23
MSH4P40965 YJR115WYJR115W 510 nt7.38□□□□□ -1.23
MSH4P40965 GCN3YKR026C 918 nt7.38□□□□□ -1.23
MSH4P40965 ZRT2YLR130C 1269 nt7.38□□□□□ -1.23
MSH4P40965 YOL107WYOL107W 1029 nt7.38□□□□□ -1.23
MSH4P40965 MKK1YOR231W 1527 nt7.37□□□□□ -1.23
MSH4P40965 MSN2YMR037C 2115 nt7.37□□□□□ -1.23
MSH4P40965 BPL1YDL141W 2073 nt7.37□□□□□ -1.23
MSH4P40965 ARG81YML099C 2643 nt7.37□□□□□ -1.23
MSH4P40965 ARE2YNR019W 1929 nt7.37□□□□□ -1.23
MSH4P40965 YNL247WYNL247W 2304 nt7.37□□□□□ -1.23
MSH4P40965 HEM2YGL040C 1029 nt7.37□□□□□ -1.23
MSH4P40965 YHL018WYHL018W 363 nt7.37□□□□□ -1.23
MSH4P40965 HAL1YPR005C 885 nt7.37□□□□□ -1.23
MSH4P40965 ATG18YFR021W 1503 nt7.37□□□□□ -1.23
MSH4P40965 YGR054WYGR054W 1929 nt7.37□□□□□ -1.23
MSH4P40965 RVB2YPL235W 1416 nt7.36□□□□□ -1.23
MSH4P40965 PXL1YKR090W 2121 nt7.36□□□□□ -1.23
MSH4P40965 MED2YDL005C 1296 nt7.36□□□□□ -1.23
MSH4P40965 SNF11YDR073W 510 nt7.36□□□□□ -1.23
MSH4P40965 LIP2YLR239C 987 nt7.36□□□□□ -1.23
MSH4P40965 YPL250W-AYPL250W-A 288 nt7.36□□□□□ -1.23
MSH4P40965 SAS4YDR181C 1446 nt7.35□□□□□ -1.23
MSH4P40965 PHO92YDR374C 921 nt7.35□□□□□ -1.23
MSH4P40965 YHR213W-AYHR213W-A 234 nt7.35□□□□□ -1.23
MSH4P40965 TOS6YNL300W 309 nt7.35□□□□□ -1.23
MSH4P40965 ELC1YPL046C 300 nt7.35□□□□□ -1.23
MSH4P40965 RSC2YLR357W 2670 nt7.34□□□□□ -1.23
MSH4P40965 GUS1YGL245W 2127 nt7.34□□□□□ -1.23
MSH4P40965 CLB4YLR210W 1383 nt7.34□□□□□ -1.23
MSH4P40965 LYS21YDL131W 1323 nt7.34□□□□□ -1.23
MSH4P40965 CLB5YPR120C 1308 nt7.34□□□□□ -1.23
MSH4P40965 VHT1YGR065C 1782 nt7.34□□□□□ -1.23
MSH4P40965 SDH4YDR178W 546 nt7.34□□□□□ -1.23
MSH4P40965 YGR011WYGR011W 327 nt7.34□□□□□ -1.23
MSH4P40965 YGR283CYGR283C 1026 nt7.34□□□□□ -1.23
MSH4P40965 YJR084WYJR084W 1272 nt7.34□□□□□ -1.23
MSH4P40965 CCP1YKR066C 1086 nt7.34□□□□□ -1.23
MSH4P40965 YKR104WYKR104W 921 nt7.34□□□□□ -1.23
MSH4P40965 PTC4YBR125C 1182 nt7.34□□□□□ -1.23
MSH4P40965 UBS1YBR165W 834 nt7.34□□□□□ -1.23
MSH4P40965 VPS72YDR485C 2388 nt7.34□□□□□ -1.23
MSH4P40965 HEM1YDR232W 1647 nt7.34□□□□□ -1.24
MSH4P40965 AIM17YHL021C 1398 nt7.33□□□□□ -1.24
MSH4P40965 NMT1YLR195C 1368 nt7.33□□□□□ -1.24
MSH4P40965 PPT1YGR123C 1542 nt7.33□□□□□ -1.24
MSH4P40965 GYP8YFL027C 1494 nt7.33□□□□□ -1.24
MSH4P40965 YDR415CYDR415C 1125 nt7.33□□□□□ -1.24
MSH4P40965 YJR107WYJR107W 987 nt7.33□□□□□ -1.24
Retrieved 100 of 7,029 protein–RNA pairs in 32 ms