Protein–RNA interactions for Protein: P38353

SSH1, Sec sixty-one protein homolog, yeastyeast

Known RBP Predictions only

Length 490 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SSH1P38353 MPM1YJL066C 759 nt5.36□□□□□ -1.55
SSH1P38353 YKL153WYKL153W 510 nt5.36□□□□□ -1.55
SSH1P38353 YBL112CYBL112C 318 nt5.36□□□□□ -1.55
SSH1P38353 IFA38YBR159W 1044 nt5.36□□□□□ -1.55
SSH1P38353 YPR196WYPR196W 1413 nt5.36□□□□□ -1.55
SSH1P38353 CMR1YDL156W 1569 nt5.36□□□□□ -1.55
SSH1P38353 MNN5YJL186W 1761 nt5.36□□□□□ -1.55
SSH1P38353 UTP4YDR324C 2331 nt5.35□□□□□ -1.55
SSH1P38353 DBP9YLR276C 1785 nt5.35□□□□□ -1.55
SSH1P38353 CNE1YAL058W 1509 nt5.35□□□□□ -1.55
SSH1P38353 GPA2YER020W 1350 nt5.35□□□□□ -1.55
SSH1P38353 TEP1YNL128W 1305 nt5.35□□□□□ -1.55
SSH1P38353 ECM14YHR132C 1293 nt5.35□□□□□ -1.55
SSH1P38353 NPA3YJR072C 1158 nt5.35□□□□□ -1.55
SSH1P38353 EFM3YJR129C 1020 nt5.35□□□□□ -1.55
SSH1P38353 COX17YLL009C 210 nt5.35□□□□□ -1.55
SSH1P38353 MKK2YPL140C 1521 nt5.34□□□□□ -1.55
SSH1P38353 SPS22YCL048W 1392 nt5.34□□□□□ -1.55
SSH1P38353 VAM7YGL212W 951 nt5.34□□□□□ -1.55
SSH1P38353 TFG2YGR005C 1203 nt5.34□□□□□ -1.55
SSH1P38353 VPS24YKL041W 675 nt5.34□□□□□ -1.55
SSH1P38353 YMR122CYMR122C 375 nt5.34□□□□□ -1.55
SSH1P38353 SCS22YBL091C-A 528 nt5.34□□□□□ -1.55
SSH1P38353 MAL11YGR289C 1851 nt5.34□□□□□ -1.55
SSH1P38353 YNL108CYNL108C 813 nt5.33□□□□□ -1.56
SSH1P38353 TSR3YOR006C 942 nt5.33□□□□□ -1.56
SSH1P38353 RRS1YOR294W 612 nt5.33□□□□□ -1.56
SSH1P38353 FOB1YDR110W 1701 nt5.33□□□□□ -1.56
SSH1P38353 OSW2YLR054C 2175 nt5.33□□□□□ -1.56
SSH1P38353 CDC1YDR182W 1476 nt5.32□□□□□ -1.56
SSH1P38353 TAX4YJL083W 1815 nt5.32□□□□□ -1.56
SSH1P38353 KKQ8YKL168C 2175 nt5.32□□□□□ -1.56
SSH1P38353 LDS1YAL018C 978 nt5.32□□□□□ -1.56
SSH1P38353 TSA1YML028W 591 nt5.32□□□□□ -1.56
SSH1P38353 GLN1YPR035W 1113 nt5.32□□□□□ -1.56
SSH1P38353 PYK2YOR347C 1521 nt5.32□□□□□ -1.56
SSH1P38353 VPS70YJR126C 2436 nt5.32□□□□□ -1.56
SSH1P38353 STB5YHR178W 2232 nt5.31□□□□□ -1.56
SSH1P38353 HST3YOR025W 1344 nt5.31□□□□□ -1.56
SSH1P38353 VPS4YPR173C 1314 nt5.31□□□□□ -1.56
SSH1P38353 RAD53YPL153C 2466 nt5.31□□□□□ -1.56
SSH1P38353 YEL068CYEL068C 333 nt5.31□□□□□ -1.56
SSH1P38353 tR(ACG)DtR(ACG)D 73 nt5.31□□□□□ -1.56
SSH1P38353 tR(ACG)EtR(ACG)E 73 nt5.31□□□□□ -1.56
SSH1P38353 tR(ACG)KtR(ACG)K 73 nt5.31□□□□□ -1.56
SSH1P38353 tR(ACG)LtR(ACG)L 73 nt5.31□□□□□ -1.56
SSH1P38353 tR(ACG)OtR(ACG)O 73 nt5.31□□□□□ -1.56
SSH1P38353 MRPS12YNR036C 462 nt5.31□□□□□ -1.56
SSH1P38353 VPS5YOR069W 2028 nt5.31□□□□□ -1.56
SSH1P38353 SNU71YGR013W 1863 nt5.3□□□□□ -1.56
SSH1P38353 FRS2YFL022C 1512 nt5.3□□□□□ -1.56
SSH1P38353 YET3YDL072C 612 nt5.3□□□□□ -1.56
SSH1P38353 SUP2tY(GUA)D 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP11tY(GUA)F1 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP6tY(GUA)F2 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP7tY(GUA)J1 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP4tY(GUA)J2 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP5tY(GUA)M1 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP8tY(GUA)M2 75 nt5.3□□□□□ -1.56
SSH1P38353 SUP3tY(GUA)O 75 nt5.3□□□□□ -1.56
SSH1P38353 TDH2YJR009C 999 nt5.3□□□□□ -1.56
SSH1P38353 APN1YKL114C 1104 nt5.3□□□□□ -1.56
SSH1P38353 YHM2YMR241W 945 nt5.3□□□□□ -1.56
SSH1P38353 RPS28AYOR167C 204 nt5.3□□□□□ -1.56
SSH1P38353 MRPS16YPL013C 366 nt5.3□□□□□ -1.56
SSH1P38353 MRC1YCL061C 3291 nt5.3□□□□□ -1.56
SSH1P38353 IME2YJL106W 1938 nt5.29□□□□□ -1.56
SSH1P38353 MAK31YCR020C-A 267 nt5.29□□□□□ -1.56
SSH1P38353 CDC34YDR054C 888 nt5.29□□□□□ -1.56
SSH1P38353 RPN11YFR004W 921 nt5.29□□□□□ -1.56
SSH1P38353 MSP1YGR028W 1089 nt5.29□□□□□ -1.56
SSH1P38353 PHO86YJL117W 936 nt5.29□□□□□ -1.56
SSH1P38353 RPE1YJL121C 717 nt5.29□□□□□ -1.56
SSH1P38353 YLR296WYLR296W 327 nt5.29□□□□□ -1.56
SSH1P38353 YNL017CYNL017C 339 nt5.29□□□□□ -1.56
SSH1P38353 YNR040WYNR040W 771 nt5.29□□□□□ -1.56
SSH1P38353 ENV9YOR246C 993 nt5.29□□□□□ -1.56
SSH1P38353 HOS1YPR068C 1413 nt5.29□□□□□ -1.56
SSH1P38353 PTK2YJR059W 2457 nt5.29□□□□□ -1.56
SSH1P38353 MDM31YHR194W 1740 nt5.28□□□□□ -1.56
SSH1P38353 RPL7AYGL076C 735 nt5.28□□□□□ -1.56
SSH1P38353 BUD14YAR014C 2130 nt5.28□□□□□ -1.56
SSH1P38353 RPL7BYPL198W 735 nt5.28□□□□□ -1.56
SSH1P38353 YPR114WYPR114W 948 nt5.28□□□□□ -1.56
SSH1P38353 AMA1YGR225W 1782 nt5.28□□□□□ -1.56
SSH1P38353 UTP9YHR196W 1728 nt5.28□□□□□ -1.56
SSH1P38353 PWP1YLR196W 1731 nt5.28□□□□□ -1.56
SSH1P38353 ERG1YGR175C 1491 nt5.27□□□□□ -1.57
SSH1P38353 VAN1YML115C 1608 nt5.27□□□□□ -1.57
SSH1P38353 CDC16YKL022C 2523 nt5.27□□□□□ -1.57
SSH1P38353 YDL023CYDL023C 321 nt5.27□□□□□ -1.57
SSH1P38353 PHM8YER037W 966 nt5.27□□□□□ -1.57
SSH1P38353 PDR16YNL231C 1056 nt5.27□□□□□ -1.57
SSH1P38353 NHA1YLR138W 2958 nt5.27□□□□□ -1.57
SSH1P38353 CLP1YOR250C 1338 nt5.26□□□□□ -1.57
SSH1P38353 GDA1YEL042W 1557 nt5.26□□□□□ -1.57
SSH1P38353 MAK32YCR019W 1092 nt5.26□□□□□ -1.57
SSH1P38353 YDR034W-BYDR034W-B 156 nt5.26□□□□□ -1.57
SSH1P38353 OPI7YDR360W 435 nt5.26□□□□□ -1.57
SSH1P38353 RRP46YGR095C 672 nt5.26□□□□□ -1.57
Retrieved 100 of 7,029 protein–RNA pairs in 474.2 ms