Protein–RNA interactions for Protein: P25847

MSH2, DNA mismatch repair protein MSH2, yeastyeast

Predictions only

Length 964 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MSH2P25847 ECM38YLR299W 1983 nt6.74□□□□□ -1.33
MSH2P25847 PPM2YOL141W 2088 nt6.73□□□□□ -1.33
MSH2P25847 YLR157W-EYLR157W-E 165 nt6.73□□□□□ -1.33
MSH2P25847 YNL200CYNL200C 741 nt6.73□□□□□ -1.33
MSH2P25847 SEC62YPL094C 825 nt6.73□□□□□ -1.33
MSH2P25847 PEX31YGR004W 1389 nt6.72□□□□□ -1.33
MSH2P25847 ARP3YJR065C 1350 nt6.72□□□□□ -1.33
MSH2P25847 FET3YMR058W 1911 nt6.72□□□□□ -1.33
MSH2P25847 MPC54YOR177C 1395 nt6.72□□□□□ -1.33
MSH2P25847 PRP46YPL151C 1356 nt6.72□□□□□ -1.33
MSH2P25847 MIP1YOR330C 3765 nt6.72□□□□□ -1.33
MSH2P25847 PRE3YJL001W 648 nt6.72□□□□□ -1.33
MSH2P25847 ATG36YJL185C 882 nt6.72□□□□□ -1.33
MSH2P25847 YLL017WYLL017W 312 nt6.72□□□□□ -1.33
MSH2P25847 RPL5YPL131W 894 nt6.72□□□□□ -1.33
MSH2P25847 GIT1YCR098C 1557 nt6.72□□□□□ -1.33
MSH2P25847 PPH22YDL188C 1134 nt6.71□□□□□ -1.34
MSH2P25847 YDR541CYDR541C 1035 nt6.71□□□□□ -1.34
MSH2P25847 MSP1YGR028W 1089 nt6.71□□□□□ -1.34
MSH2P25847 DYS1YHR068W 1164 nt6.71□□□□□ -1.34
MSH2P25847 ADD66YKL206C 804 nt6.71□□□□□ -1.34
MSH2P25847 GCN3YKR026C 918 nt6.71□□□□□ -1.34
MSH2P25847 SUR7YML052W 909 nt6.71□□□□□ -1.34
MSH2P25847 YHR020WYHR020W 2067 nt6.71□□□□□ -1.34
MSH2P25847 YDL144CYDL144C 1071 nt6.7□□□□□ -1.34
MSH2P25847 YGL072CYGL072C 360 nt6.7□□□□□ -1.34
MSH2P25847 CUP2YGL166W 678 nt6.7□□□□□ -1.34
MSH2P25847 FPR3YML074C 1236 nt6.7□□□□□ -1.34
MSH2P25847 OSW5YMR148W 447 nt6.7□□□□□ -1.34
MSH2P25847 YNL097W-AYNL097W-A 156 nt6.7□□□□□ -1.34
MSH2P25847 TAE1YBR261C 699 nt6.7□□□□□ -1.34
MSH2P25847 DDC1YPL194W 1839 nt6.7□□□□□ -1.34
MSH2P25847 BDF2YDL070W 1917 nt6.7□□□□□ -1.34
MSH2P25847 NMT1YLR195C 1368 nt6.69□□□□□ -1.34
MSH2P25847 snR78snR78 87 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)BtG(GCC)B 71 nt6.69□□□□□ -1.34
MSH2P25847 SUF16tG(GCC)C 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)D1tG(GCC)D1 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)D2tG(GCC)D2 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)EtG(GCC)E 71 nt6.69□□□□□ -1.34
MSH2P25847 SUF20tG(GCC)F1 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)F2tG(GCC)F2 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)G1tG(GCC)G1 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)G2tG(GCC)G2 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)J1tG(GCC)J1 71 nt6.69□□□□□ -1.34
MSH2P25847 SUF23tG(GCC)J2 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)MtG(GCC)M 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)O1tG(GCC)O1 71 nt6.69□□□□□ -1.34
MSH2P25847 SUF17tG(GCC)O2 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)P1tG(GCC)P1 71 nt6.69□□□□□ -1.34
MSH2P25847 tG(GCC)P2tG(GCC)P2 71 nt6.69□□□□□ -1.34
MSH2P25847 YKR073CYKR073C 321 nt6.69□□□□□ -1.34
MSH2P25847 TMA46YOR091W 1038 nt6.69□□□□□ -1.34
MSH2P25847 VMS1YDR049W 1899 nt6.68□□□□□ -1.34
MSH2P25847 PRY3YJL078C 2646 nt6.68□□□□□ -1.34
MSH2P25847 NFI1YOR156C 2181 nt6.68□□□□□ -1.34
MSH2P25847 CYC8YBR112C 2901 nt6.68□□□□□ -1.34
MSH2P25847 YJR107WYJR107W 987 nt6.68□□□□□ -1.34
MSH2P25847 MHT1YLL062C 975 nt6.68□□□□□ -1.34
MSH2P25847 YMR295CYMR295C 594 nt6.68□□□□□ -1.34
MSH2P25847 PEX3YDR329C 1326 nt6.68□□□□□ -1.34
MSH2P25847 CEF1YMR213W 1773 nt6.67□□□□□ -1.34
MSH2P25847 ZWF1YNL241C 1518 nt6.67□□□□□ -1.34
MSH2P25847 YDL129WYDL129W 876 nt6.67□□□□□ -1.34
MSH2P25847 VMA3YEL027W 483 nt6.67□□□□□ -1.34
MSH2P25847 SKI8YGL213C 1194 nt6.67□□□□□ -1.34
MSH2P25847 LSM12YHR121W 564 nt6.67□□□□□ -1.34
MSH2P25847 YUR1YJL139C 1287 nt6.67□□□□□ -1.34
MSH2P25847 SWD1YAR003W 1281 nt6.67□□□□□ -1.34
MSH2P25847 CUE4YML101C 354 nt6.67□□□□□ -1.34
MSH2P25847 RPC19YNL113W 429 nt6.67□□□□□ -1.34
MSH2P25847 MRPL10YNL284C 969 nt6.67□□□□□ -1.34
MSH2P25847 RPS28AYOR167C 204 nt6.67□□□□□ -1.34
MSH2P25847 DAP1YPL170W 459 nt6.67□□□□□ -1.34
MSH2P25847 POS5YPL188W 1245 nt6.67□□□□□ -1.34
MSH2P25847 YMR155WYMR155W 1644 nt6.67□□□□□ -1.34
MSH2P25847 VHS1YDR247W 1386 nt6.67□□□□□ -1.34
MSH2P25847 ASN1YPR145W 1719 nt6.67□□□□□ -1.34
MSH2P25847 LSM6YDR378C 261 nt6.66□□□□□ -1.34
MSH2P25847 HSP12YFL014W 330 nt6.66□□□□□ -1.34
MSH2P25847 OPI8YKR035C 642 nt6.66□□□□□ -1.34
MSH2P25847 DOM34YNL001W 1161 nt6.66□□□□□ -1.34
MSH2P25847 NCE103YNL036W 666 nt6.66□□□□□ -1.34
MSH2P25847 TOS6YNL300W 309 nt6.66□□□□□ -1.34
MSH2P25847 UBA3YPR066W 900 nt6.66□□□□□ -1.34
MSH2P25847 MKC7YDR144C 1791 nt6.66□□□□□ -1.34
MSH2P25847 CRP1YHR146W 1398 nt6.66□□□□□ -1.34
MSH2P25847 DOT1YDR440W 1749 nt6.65□□□□□ -1.34
MSH2P25847 URA7YBL039C 1740 nt6.65□□□□□ -1.34
MSH2P25847 YDR415CYDR415C 1125 nt6.65□□□□□ -1.34
MSH2P25847 ERP2YAL007C 648 nt6.65□□□□□ -1.34
MSH2P25847 YKR045CYKR045C 552 nt6.65□□□□□ -1.34
MSH2P25847 MFA2YNL145W 117 nt6.65□□□□□ -1.34
MSH2P25847 UIP4YPL186C 915 nt6.65□□□□□ -1.34
MSH2P25847 EDE1YBL047C 4146 nt6.65□□□□□ -1.35
MSH2P25847 COQ1YBR003W 1422 nt6.65□□□□□ -1.35
MSH2P25847 AVO1YOL078W 3531 nt6.64□□□□□ -1.35
MSH2P25847 LAP2YNL045W 2016 nt6.64□□□□□ -1.35
MSH2P25847 STT3YGL022W 2157 nt6.64□□□□□ -1.35
MSH2P25847 PHM8YER037W 966 nt6.64□□□□□ -1.35
Retrieved 100 of 7,029 protein–RNA pairs in 139 ms